Mus caroli (Ryukyu mouse): 110294263
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Entry
110294263 CDS
T05910
Symbol
Papolb
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110294263 (Papolb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110294263 (Papolb)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110294263 (Papolb)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110294263 (Papolb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Motif
Other DBs
NCBI-GeneID:
110294263
NCBI-ProteinID:
XP_021018023
Ensembl:
MGP_CAROLIEiJ_G0027962
UniProt:
A0A6P5PP44
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All DBs
Position
5:complement(135261600..135263912)
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AA seq
639 aa
AA seq
DB search
MMPFAVTTQGAQQPAPAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQ
RRILILQKLNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRNDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKETADKEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLRRKELHQLLPNHVLQKKETHLTESVRLTAVNDSSLLLSIDSENSMTAPSPT
GTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALSESIPQIPSQ
PTISPPPKPTMTRVVSSTHLVNHPSDLQEIQQRTYPILY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatttgcggtgaccacccaaggagcacaacaaccggctcccgccccgaagcag
ttcggcatatcgtcccccatcagcctggccgcccccaaggacacagaccgcgaactcacc
cagaagctgatcgagaccctccagcccttcggggtgtttgaagaggaagaggaactgcag
cgcaggattttaattttgcagaaattaaataatctggtgaaggaatggatccgagaaatc
agtgaaagcaggaatcttccacaagctgtaattgagaatgttggggggaaaatttttacg
ttcggctcttaccgattaggagtacacacgaaaggtgcagatatcgatgctttgtgcgtt
gcaccaagacacgtggatcgaaatgactttttcacctccttctatgacaaattgaaacta
caagaggaagtaaaagatttaagagctgttgaggaggcctttgtgccggttatcaaactg
tgttttgatggaatagagattgatattttgtttgcaagattagcattgcagactattcca
gaagatttggacctacgagatgatagtctgcttaaaaatttagatattaggtgcataaga
agccttaacggttgccgggtaactgatgaaattttacatctagtaccaaacattgacagc
ttcaggttaacactgagagccatcaaattatgggccaaatgccacaacatctattccaat
atattgggtttccttggaggtgtttcctgggctatgctagtagcaagaacttgccagctt
tacccaaatgcaatagcatccactcttgtgcgaaaatttttcttggtgttttctgagtgg
gaatggccaaatccagtgttgttaaaagaaccagaagaacgaaatcttaatttgcctgta
tgggacccaagagtgaatcctagtgacaggtaccatcttatgcctataattacaccagca
tacccacagcagaactccacgtacaatgtgtctgtttcaaccaggatggtcatgattgag
gagtttaagcaaggacttgctatcacacatgaaattctgctgaataaggcagaatggtcc
aaactttttgaagctccaagcttttttcaaaaatacaagcattatattgtacttctggca
agtgcgccaacagagaaacaacatttagagtgggtgggcttggtggaatcaaagatccga
attctggttgggagcctggaaaagaatgagttcattactctggctcatgtgaatcctcag
tcatttccagcaccaaaagaaactgctgacaaggaagaatttcgtactatgtgggtgatc
gggttagtgttgaagaagccagaaaactctgaaattctcagtattgatctcacctatgat
attcagtctttcacagatacagtgtacagacaagcaataaatagtaagatgtttgagatg
gatatgaagattgctgcaatgcatctaagaaggaaggaacttcatcagctacttccaaat
catgttcttcagaaaaaggaaacacatttaacagaaagtgtaaggttgacagctgtgaat
gacagcagccttctcttgtctatagacagtgaaaacagcatgactgctccttcacctact
ggcactatgaagacaggtccactgactggaaaccctcagggcagaaacagtcctgctctg
gctgttatggcagcatctgtgactaacatacagtttcctgatgtttccttgcagcatgtg
aatcccatagaaagctcaggaattgcactgagtgaaagcatccctcagattccctcacaa
cctaccatttcaccaccacctaagcctacaatgaccagagtggtttcttcgacacatctg
gtaaaccatccatctgaccttcaggaaatacagcaacgaacatacccaatcctatactag
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