Mus caroli (Ryukyu mouse): 110294285
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Entry
110294285 CDS
T05910
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04136
Autophagy - other
mcal04140
Autophagy - animal
mcal05010
Alzheimer disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110294285 (Wipi2)
04136 Autophagy - other
110294285 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110294285 (Wipi2)
05014 Amyotrophic lateral sclerosis
110294285 (Wipi2)
05016 Huntington disease
110294285 (Wipi2)
05017 Spinocerebellar ataxia
110294285 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
110294285 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110294285 (Wipi2)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110294285 (Wipi2)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110294285 (Wipi2)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110294285 (Wipi2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_Aladin
VID27
Motif
Other DBs
NCBI-GeneID:
110294285
NCBI-ProteinID:
XP_021018062
Ensembl:
MGP_CAROLIEiJ_G0027964
UniProt:
A0A6P5PJM9
LinkDB
All DBs
Position
5:135367650..135406986
Genome browser
AA seq
445 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSASIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGS
METTSEIVDSASHDCPLATQTYGTAAAKGAYVPSSPTRLGKGQDANLEAYTDDLGAVGGA
CLEDEASALRLDEDSEHPPMILRTD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggagaggccggcgccggccagctgctgttcgccaacttc
aaccaggataacacgtccctagctgttggtagtaagtccgggtataagtttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgacactgaagatgtctgcatt
gtggagagattgttctcaagcagcttggtggccattgtcagcctcaaagcccccaggaag
ctgaaggtttgccactttaagaagggaactgagatatgcaactacagctactccaacaca
atcctggctgtgaagctgaacaggcagcggctcattgtgtgtctggaagagtcgctctac
atacacaacatccgggacatgaaggtacttcataccatccgagagacacccccaaaccct
gcaggcttgtgtgcactgtcaataaacaatgacaactgttacttggcgtatccagggagt
gcgagcattggagaggtgcaggtcttcgacaccattaacttgagagctgcaaacatgatc
ccagctcatgatagtcccttagcagccctggcttttgatgcaagtgggaccaagcttgcc
actgcttctgagaaggggactgtgattcgggtgttttccattccagagggacagaagctg
tttgagttcaggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctctctgcatccagcaacaccgaaacagtgcacatcttcaagcttgag
gctgtgagggaaaaacctccggaagagcccaccacctggactggctactttgggaaggtt
ctcatggcatctaccagctacctgccctcacaagtgacagaaatgttcaaccagggcagg
gccttcgccactgtccgcctgccattctgtggccacaaaaacatctgctcactaaccaca
attcagaagatcccacgattgctggtaggagcatcagatggctatttgtacatgtacaac
ctggacccccaggagggcggcgagtgtgcgctgatgcgtcagcacaggcttgatggcagt
atggagacgaccagtgaaatcgtagactctgcatctcatgactgccccttagcaacgcag
acatacggcacagcagctgccaaaggtgcctatgtgccctcgtcccccacaagacttggg
aaagggcaggacgccaacttagaagcctacacagatgacctgggtgctgtgggtggtgca
tgcctagaggatgaagccagtgctctgcgcctggatgaagacagcgaacatcctcccatg
attctccggactgactga
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integrated database retrieval system
