Mus caroli (Ryukyu mouse): 110294289
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Entry
110294289 CDS
T05910
Symbol
Stx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04130
SNARE interactions in vesicular transport
mcal04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110294289 (Stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110294289 (Stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110294289 (Stx18)
Membrane trafficking [BR:
mcal04131
]
SNARE
Syntaxin (Qa)
Stx-rER
110294289 (Stx18)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6279
Phage_CP76
DUF4559
Motif
Other DBs
NCBI-GeneID:
110294289
NCBI-ProteinID:
XP_021018068
Ensembl:
MGP_CAROLIEiJ_G0027174
UniProt:
A0A6P5PVT1
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Position
5:32903406..32996914
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AA seq
338 aa
AA seq
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MAVDITLLFRASVKTVKTRNKALGVAVGGGADGSRDELFRRSPRPKGDFSSRAREVISHI
GKLRDFLLEHRKEYINAYSHTMSDYGRMTDTERDQIDQDAQIFIRTCSEAIQQLRTEAHK
EIHSQQVKEHRTAVLDFVDDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPHTKRKDS
TSEKAPQNASQDSEGKPAAEELPGMTQEKPLAESQPELGTWGDGKGEDELSPEEIQMFEQ
ENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKE
GNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacatcacactgctcttccgggctagcgtcaagacagtgaagacgcggaat
aaggctctgggagtggccgtgggtggcggggccgatggcagccgggatgagctgttccgc
agaagccctcggcccaagggagacttctccagccgggcccgtgaagtgatttctcacatt
gggaagctgagagattttctcctggagcacaggaaggagtatattaatgcctacagccac
accatgtctgactatgggaggatgacagacacagagcgagaccagatagaccaggatgct
cagatattcataaggacctgttcagaagcaatccagcaactcagaacagaagcccacaag
gagatacattcccagcaagtgaaggaacacaggactgcggttttggatttcgttgacgat
tacttaaaaagagtgtgtaagctttactctgaacaaagagccatccgagtgaagcgcgtg
gtggacaagaaaagactatctaagctggaacctgagccacataccaagaggaaagactct
acatctgagaaagcccctcagaacgcttcccaggactctgaaggaaagcctgctgctgag
gagctgccaggtatgactcaagaaaagcctttggctgaatcacagcccgaactgggaacc
tggggcgatggcaagggtgaagatgagctgtctccagaagagatacagatgtttgaacaa
gaaaatcagcgactcattggtgaaatgaacagcttgtttgacgaagtgaggcaaatcgaa
gggaaagtcgttgaaatttccagactccaagagatattcaccgaaaaggttttgcaacag
gaaactgagatcgacagcattcaccagttagtcgtgggggcaactgaaaatattaaggaa
ggcaacgaagacatccgagaggccatcaaaaacaatgcaggtttccgagtgtggatcctc
ttcttcctcgtcatgtgttccttttccttgctcttcctcgactggtatgacagctag
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integrated database retrieval system