Mus caroli (Ryukyu mouse): 110294301
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Entry
110294301 CDS
T05910
Symbol
Usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X2
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110294301 (Usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110294301 (Usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110294301 (Usp30)
04121 Ubiquitin system [BR:
mcal04121
]
110294301 (Usp30)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110294301 (Usp30)
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110294301 (Usp30)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110294301 (Usp30)
Ubiquitin system [BR:
mcal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110294301 (Usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
110294301
NCBI-ProteinID:
XP_021018090
Ensembl:
MGP_CAROLIEiJ_G0027588
UniProt:
A0A6P5PP94
LinkDB
All DBs
Position
5:107021404..107078527
Genome browser
AA seq
501 aa
AA seq
DB search
MALLLGLPTRGRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKKRRKGLVPGLVNLGNT
CFMNSLLQGLSACPAFVKWLEEFTTQYSRDQQGPHTHQCLSLTLLSLLKALSCQEVTEDE
VLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQPRVTHLFDVHSLEQQS
EMTPRQVTCHTRGSPHPTTNHWKSQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIP
AATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLTGEKVERQRSTFVKQLKLGK
LPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDFYKYRLLGHKPSQHGSKATENPGS
APEVQDAQASPKPGLSQPGAPKTQIFLNGACSPSLLPALPSPVAFPLPVVPDYSSSTYLF
RLMAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDTVRKASLQEVLSSSAYL
LFYERVLSRVQQQGREYRSEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccttgctgctgggccttcccacccgaggcagatacaaagtcatgaagaactgggga
gtgatcggtggcattgccgctgccctggcagcagggatctatgttatttggggtcccatt
acagagaggaagaagcggagaaaagggcttgtgcccggccttgtcaatctggggaatacc
tgcttcatgaactcgctgctgcagggcctgtctgcctgccctgcgtttgtcaagtggctg
gaagagtttaccacccagtactccagggaccagcaggggccacacactcaccagtgcctg
tccttaacactgctgagcctcctgaaagctctgtcctgccaagaagtcaccgaggacgag
gtcttggacgccagctgtctgctggacgtcctgagaatgtacagatggcagatctcatcc
tttgaggagcaggatgctcacgagctgttccatgtcatcacctcgtcactggaggatgag
agagaccgccagcctcgagtcacccacttgtttgatgtgcattccctggagcagcagtca
gaaatgactcccagacaagtcacctgccacacgagagggtcccctcaccccacgaccaat
cactggaagtctcagcaccctttccatggaagactcaccagtaacatggtgtgcaaacac
tgtgaacaccagagtcctgtccggtttgacacctttgacagcctttccctcagtattcca
gctgccacttgggggcacccactgacactggaccactgccttcaccacttcatctcatcc
gagtccgtgcgagacgttgtgtgtgacaactgtacaaagattgaagcaaaggggacactg
accggggagaaggtggagcgccagaggagcacctttgttaaacagttaaaactcggaaag
ctgccacagtgcctctgcatccacctgcagcggctcagctggtccagccacggcacgccc
ttgaagcggcatgagcacgtgcagtttaacgagtttctgatgatggacttctacaagtac
cgcctcctgggacacaagcccagccagcatggctccaaagccactgagaacccaggatct
gccccggaagtacaggatgcacaggcgtccccaaagccaggtctgagtcagccaggggcc
cccaagacacagatttttctgaatggcgcctgctccccgtctctgttgccagccctgcct
tccccggtggccttccctctgccagtggttcctgactacagctcctccacatacctcttc
cgcttgatggcagttgtcgtccaccatggagacatgcactctggacactttgttacctac
agacggtcaccaccttctgccaagaaccctctctcaaccagtaaccaatggctgtggatt
tccgacgacaccgtccgcaaggccagcctgcaggaggtcctgtcctccagcgcctacctg
ctgttctatgagcgagttctgtccagggtgcagcagcaggggcgagagtataggtctgag
gagtga
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