Mus caroli (Ryukyu mouse): 110294302
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Entry
110294302 CDS
T05910
Symbol
Brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110294302 (Brat1)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110294302 (Brat1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
RTP1_C1
TetR_C_36
Motif
Other DBs
NCBI-GeneID:
110294302
NCBI-ProteinID:
XP_021018094
Ensembl:
MGP_CAROLIEiJ_G0027954
UniProt:
A0A6P5PJQ4
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Position
5:133421593..133436177
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AA seq
867 aa
AA seq
DB search
MVHFALSGLIPLAEGCGGGIRTPRLTRSRGERTSYPDLGGTACLIMDPECSRLLPALCAV
LADPRQLVADDTCLEKLLDWFKTVTEAESSLQVLQDHPCLMELLSHVLKPQDVSPRVLSF
ALRLVGVFAAQEDCFEYLQQGELLLGLFGESGAPSWAAWSIPSVRSGWIQGLCSLAHHPS
ALYFLADSGAVDTLFSLQGDPSLFVASAASQLLVHILALSMQGGAPGSPVPEAAAWPMCA
QKIVNHVDESLHAKATPQVTQALNVLTTTFGRCHNPWTGVLWERLSPPVARLFERDPIPA
VHALMDLLLRVARSPVLNFAACGLWEMLAQTLSRLSPTQAGPLALGTLKLQHCPQELRTQ
AFGVLLQPLACILKATTQAPGPPGLLDGTVGSLLTVDTLLSSKSACVGLLCQTLAHLEEL
QMLPQCPSPWPQVHLLQAAVTILHLCDGSADPSSSAGGRLCGTLGGCVRVQRAALDFLGT
LSQGTSPLELVLEVFAVLLKTLESPESSPMVLKKAFQATLRWLQNPHKTPSSSDLSSDAL
LFLGELFPILQKRLCSPCWEVRDSTLEFLTHLIRHWGGQADFREALRSSEVPTLALQLLQ
DPESYVRASAVGAAGQLSSQGLQAAPASPESPQAQQGLLMDLMHILSADSEGFPRRAVLR
VFTDWLRDGHTDVVRDTEWFVATVLQAVSRDLDWEVRVQGLELARVFLTQALGQPSLHCP
YTVGLPRASSPRPHLEFLQTLCRLPLFEFAFCALLDCDRPVAQKACDLLLFLRDKTVLCS
SPREAGDSPNSASVEAALQRWREGEQAQPLGDLDPEAMLAILRALDLEGLQGRLAKSSDH
VEKSPQSLLQDMLATVGVLEENEADCY
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggtgcattttgcactctcgggcctaattcccttagcggagggatgcgggggcgggatt
agaacccccaggctaactcgcagtcgcggagagcgcacctcttacccggatttgggagga
actgcctgcctgatcatggacccagaatgctccaggctcctcccggctctctgtgctgtt
ttggcagatcccagacagctggtggcagatgacacctgcttggagaaactgctggactgg
tttaaaacagtgacagaggcagagtccagcctccaggtactacaggaccatccctgctta
atggagctcctgtcccatgtgctgaagccacaggacgtgagccctagggtcctctccttt
gctctgcgccttgttggggtcttcgcagcccaggaagactgtttcgagtaccttcagcag
ggagagttgttgctggggctctttggggagtcaggtgcccccagctgggcagcctggagc
atcccaagtgtgcgcagcggctggatccagggcctgtgctccctggcacaccaccccagc
gccctgtacttcctggctgacagtggtgctgtggacacgctcttctccttgcagggagac
cccagcctgttcgtcgcctcagcagccagccagctcctagtacacatcctagctctgtcc
atgcaaggtggagccccagggtcccccgtccctgaagctgctgcttggcctatgtgtgcc
cagaagattgtgaaccatgtggatgagtccctgcatgccaaagccaccccccaggtcaca
caggccttgaatgtcctgactacgaccttcgggcgctgccataacccctggacaggggtc
ctctgggagcggctaagtccccctgttgcccgcctgtttgagagagaccccattccagcc
gtgcacgcgctcatggaccttcttcttcgtgtggccaggtcgcctgtgttgaattttgca
gcctgtggcctgtgggagatgctggcccagactctgagccgcctgagtcccacgcaagct
gggcctctagccctggggaccctgaaacttcagcactgtccccaggaactgaggacccag
gcctttggagtcctcctacagccactggcctgtatcctgaaagctaccactcaggcccct
ggacctccaggcttgctggacgggactgtgggtagcttgctgactgtggatacactcttg
tcttcaaagtcagcctgtgtgggactcctttgccagactctggctcacctggaggagctg
cagatgctgccccagtgcccctcaccctggccacaggtgcatctgctgcaagctgctgtg
actatattgcatctctgtgatggctcagcggaccccagctccagtgcgggaggccgtctc
tgtgggactctgggtggctgtgttcgtgtccagcgagcagcccttgacttcttggggacc
ctgtctcaggggacaagccccctggagttggttctggaggtatttgctgttctcctgaag
accctggagagcccggaatccagccccatggtcctaaagaaggccttccaggccacactc
agatggctccagaacccacacaagacccccagcagctctgatctcagctccgatgccctg
ctgtttctcggagagctattccccatactacagaagcgcctgtgcagcccatgttgggag
gtgagggactccaccttggagttcctgacgcatctgatccgacactggggagggcaggct
gacttcagagaggcactgcgttcctcagaagtacccacacttgccctccagcttctccaa
gacccagagagttacgtccgagcaagtgccgtgggtgccgctggacagctctccagccag
ggtctgcaggccgctcccgccagccccgagagcccgcaggcccagcagggactactcatg
gaccttatgcatatcctgtccgctgactcagagggcttccctcgaagggctgtgttacgg
gtcttcacggactggctgagggatggccacactgacgtggttcgagacacggagtggttc
gtggccactgttctccaggcagtgagccgggatctggactgggaggtccgagtgcagggt
ttggagctggcacgggtgttcctcacccaggcactgggccagcccagcctccactgtccc
tatacagtgggcctgcccagggcctcctctccccgcccacacctggaattcttgcagact
ctctgccgtctgcccctctttgagtttgccttttgtgccttgcttgactgtgaccgaccg
gtggcccaaaaggcctgtgacctgctcctcttcttgagggacaagacagttctctgcagt
agccctcgggaggcaggggacagccccaactcagcctcagtggaggctgccctgcagagg
tggcgggaaggagagcaggcccagcccctaggggacctggatcctgaggccatgctagcc
atcctcagggccttagacctggagggcctgcagggcaggctggccaagagcagcgaccat
gtggagaagagtccacagtccctgctgcaggacatgctggccacggtgggtgtgttggag
gagaacgaagctgactgctactaa
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