Mus caroli (Ryukyu mouse): 110294450
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Entry
110294450 CDS
T05910
Symbol
Abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110294450 (Abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110294450 (Abraxas1)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
110294450 (Abraxas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF2096_N
DUF3461
Lge1
DUF948
Motif
Other DBs
NCBI-GeneID:
110294450
NCBI-ProteinID:
XP_021018352
Ensembl:
MGP_CAROLIEiJ_G0027459
UniProt:
A0A6P5PKB3
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All DBs
Position
5:complement(93744209..93761023)
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AA seq
422 aa
AA seq
DB search
MPRDSGCGGSDRGGSMEGESTLGVLSGFVLGALTFHHLNTDSDTEGFLLGEMKGEAKNSI
TDSQMDNVKVVYTIDIQKYIPCYRLFSFYNSLGEVNEQALKKVLSNVRKTVVGWYKFRRH
SDQIMTFREQLLHRNLQTHLSSPELVFLLLTPSITTESCSTHCLEHALYKPQRGLFHRVP
LVVTNLGMSDQLGYKTESASCTSTVFSRAVRTHSSQFFNEDGSLKEVHKINEMYAAVQEE
LKSICQKVEQSEREVEKLLMDVNQLKEVRKKQQAQATGAGEKNVQRNPQENILLCQALRT
FFPESEVLHSCVISLKNRHISPSGCNVNHHVDVVDQLTLMVEYVYSPEASPVPTAQLRKR
KALDTHDQGPVKRPRLLETESRPSVAASRSRHQDKASSSSLDIDIEMGSPEGDADYPRSP
TF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgatagtggctgtggcggcagcgaccgaggcggcagtatggagggcgagagc
acgttgggggtgctgtctggcttcgtgctcggcgcactcactttccatcatctcaacaca
gactcagacacggaaggttttctcctcggtgaaatgaaaggtgaagccaagaatagcatt
actgattcacagatggacaacgttaaagttgtttatacaattgacattcagaaatatatc
ccatgctaccggctttttagcttttataattctttaggtgaagtaaacgaacaagccctg
aagaaggttctttcaaatgtcagaaagactgtggtgggctggtataaattccgtcgtcac
tcggatcagatcatgacatttagggagcagttgctccacagaaacttacagacacatctt
tcaagccctgagctggttttcctgttgttaacaccaagtataacaacagaaagctgctcc
actcactgcctggaacacgccttatataaacctcaaagggggctttttcatagggtacca
ttggtggttaccaatctgggaatgtctgatcaactgggttataaaacagaatctgcttcc
tgtacgtccactgtctttagtagagctgtgaggacacacagttctcagttctttaatgaa
gatggatcattaaaggaagtccataagataaatgaaatgtatgctgctgtacaagaagag
ttaaagagtatatgccaaaaagttgaacaaagtgaacgagaagtagagaaactattgatg
gatgtaaaccaattaaaagaagttagaaaaaagcagcaagcacaggctacaggagcagga
gagaagaatgtccagagaaacccccaggagaacatccttctttgtcaagctttgcgaaca
ttttttccagagtctgaagttcttcattcttgcgttatttctttgaaaaatagacacatt
tctcccagtgggtgtaatgttaaccaccatgttgatgtagtggatcagctgaccttaatg
gtagagtatgtgtacagccctgaagctagtccagtgcccacagcccagctacgtaaacgg
aaggctctagacacacatgaccaggggcctgtgaagagaccacggctgctggagacagaa
agcagaccttctgtggcagcatcccgcagcaggcaccaagacaaggcttcctcaagcagc
ctagatatagacatagagatggggagcccagaaggtgatgctgactatcctcgctctccc
acattttaa
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