Mus caroli (Ryukyu mouse): 110294728
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Entry
110294728 CDS
T05910
Symbol
Vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04140
Autophagy - animal
mcal04142
Lysosome biogenesis
mcal04145
Phagocytosis
mcal04148
Efferocytosis
mcal05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
110294728 (Vps33a)
04142 Lysosome biogenesis
110294728 (Vps33a)
04140 Autophagy - animal
110294728 (Vps33a)
04148 Efferocytosis
110294728 (Vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110294728 (Vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110294728 (Vps33a)
Membrane trafficking [BR:
mcal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110294728 (Vps33a)
Hops complex
110294728 (Vps33a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
DTP-pb9_A-dom_C
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
110294728
NCBI-ProteinID:
XP_021018815
Ensembl:
MGP_CAROLIEiJ_G0027730
UniProt:
A0A6P5PQV9
LinkDB
All DBs
Position
5:complement(116540111..116565100)
Genome browser
AA seq
597 aa
AA seq
DB search
MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPARDFHILFVPRRSLL
CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPVFDNLLLLDRNVDLLTPL
ASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAE
LIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNSYIEDCIAQKHPLIKVLRLVCLQSVCNSG
LKQKVLDYYRREILQTYGYEHILTLNNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNE
QNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQP
GENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGNSWIEALMEKPF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacctgtcctacgggcgagtgaacctgaacgtgctgcgcgaggcggtgcgt
cgggagctgcgcgagttcctggacaagtgcgctgggagcaaggcaatagtgtgggatgag
tacttaacaggaccatttggactgatcgcacagtactcactactaaaggaacatgaagtg
gaaaaaatgttcacacttaaaggaagtcgtttgccggcagctgatgtgaagaatatcatt
tttttggtcagacccaggctagagttgatggacataattgctgagaatgtactcagtgag
gacaggcgtggccctgccagggatttccatattttgtttgtgcctcgccggagcctactg
tgtgagcaacggctgaaggacctgggagttttgggatcctttattcatcgagaagaatac
agtttggatctcattccatttgatggggacctcttatccatggagtcagagggggctttc
aaagagtgctacctggaaggcgaccagactagcctgtaccacgcagccaaggggctgatg
accctgcaggcgctgtatggaactatccctcagatctttgggaaaggagagtgtgctcgg
caagtggccaatatgatggtcaggatgaagagggagttcacgggaagccagaactcagtg
ttccccgtgtttgataacctcttgctgcttgatcgcaacgtggatctcctgacgccactc
gcctcccagctcacgtatgaaggcctcatcgatgagatttacggcattcagaacagttat
gtgaagttgcctccagagaagtttgcacccaagaagcagggcggcggcggcgggaaggac
cttcccacggaggccaagaaacttcagctcaactccgcagaggagctctacgccgagatc
cgggacaagaacttcaacgctgttggctctgtgctcagcaagaaggcgaagatcatctct
gcagcgttcgaggagcgacacaacgctaagacagtcggggagatcaagcagttcgtgtcc
cagctaccccacatgcaggcagccaggggatcgcttgccaaccacacctcaattgcagag
ttaatcaaagacgtcaccacttctgaagacttctttgataagttgacagtggagcaggag
ttcatgtccgggatagacactgataaggtcaacagttacatcgaggactgcattgcccaa
aagcatccactcatcaaggtgctgagactggtctgcctccagtctgtgtgcaacagcggg
ctcaagcagaaggtgctggactattacagaagggagatcctccagacctacggctatgag
cacatactgaccttgaacaacctggagaaggccggcctgctcaaggctcagacagggggc
agaaacaattacccaacaatccggaaaacactgcgcctctggatggacgatgtcaatgaa
caaaaccccacagacatatcctatgtgtacagcggttatgctccactcagcgtgcgactg
gctcagctcctttcccggccaggctggcggagcatcgaggaggttctccgcattctccca
gggccccactttgaagaaaggcagccactgcccactgggctgcagaagaaacgccagcca
ggagaaaacagagtcacactggtatttttcctcgggggcgtcacctttgcagaaatagcc
gccctgcgctttctgtcccagctggaagatggaggcaccgagtatgtcattgcgaccact
aaactgatgaatggaaacagctggatagaagctctcatggaaaagcctttctag
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integrated database retrieval system
