Mus caroli (Ryukyu mouse): 110294778
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Entry
110294778 CDS
T05910
Symbol
Cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04022
cGMP-PKG signaling pathway
mcal04024
cAMP signaling pathway
mcal04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
110294778 (Cnga1)
04022 cGMP-PKG signaling pathway
110294778 (Cnga1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110294778 (Cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110294778 (Cnga1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110294778 (Cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Ndc1_Nup
Tim54
Ion_trans_2
Sec62
SLC52_ribofla_tr
RNA_polI_A34
RNA_pol_Rpc4
Peptidase_U57
NPR3
ADI
DDHD
Zip
DUF2828
Motif
Other DBs
NCBI-GeneID:
110294778
NCBI-ProteinID:
XP_021018901
Ensembl:
MGP_CAROLIEiJ_G0027287
UniProt:
A0A6P5PS89
LinkDB
All DBs
Position
5:complement(65544009..65583270)
Genome browser
AA seq
684 aa
AA seq
DB search
MKRNIINTWHSFVNIPNVIVPAIEKEIRRMENGACSSFSDDDNGSLSEESENEDSLFRSN
SYKRQGPSQRQQHLPGTMALFNVNNSSNKDQEPKEKKKKKKEKKSKADDKNENKKDPEKK
KKKEKEKEKKKKEEKTKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARAC
FDELQSDYLEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDKMKLIEKYKANLQFKL
DVLSVIPTDLLYIKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIV
IIIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPP
PVLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSK
DMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLL
VELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEIS
ILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGL
LDINIANMGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP
LIETEFSALEEPGGESELTESLQD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaatattatcaatacatggcattcctttgtaaatattcccaatgtgatcgta
ccagccattgaaaaggaaatccggcggatggaaaatggagcgtgcagctccttttctgac
gatgacaatggctctctgtctgaagaatcagagaatgaggactctctctttagaagcaac
tcgtacaaaaggcaaggaccatcacagaggcagcagcacttgccaggtactatggctctt
ttcaatgtcaacaacagcagcaacaaagaccaagagccaaaggagaaaaagaaaaagaag
aaggaaaagaagagcaaggccgatgataaaaatgaaaataaaaaggacccagagaagaaa
aagaagaaggaaaaggaaaaagagaagaaaaagaaggaggagaaaaccaaagataagaaa
gaagaggagaagaaagaagtggtggttatcgatccttcaggaaacacatactacaactgg
ctgttttgtatcactttgcctgtgatgtacaactggacgatgattattgcaagagcatgt
tttgatgaactccagtctgattacctggaatactggctcatttttgattacgtatcagat
gtagtctatcttgccgatatgtttgtgcgaacaaggacaggttacctggaacaagggctg
ctagtgaaagacaaaatgaaactcatagagaaatacaaagcaaacctgcagtttaaactt
gatgttctgtcagtgataccgactgatctgctgtacatcaagtttgggtggaactatcca
gaaatcaggttaaaccggctgttaaggatctctcgaatgtttgagttcttccagaggacg
gaaacaaggaccaattacccaaacatctttaggatttcaaaccttgtgatgtacatcgtc
atcatcatccactggaacgcttgtgtgtattattccatctcaaaagctattggatttggg
aatgacacatgggtctaccctgatgttaatgatcctgaattcggccgcttagctagaaaa
tacgtctacagcctttattggtctaccttgactttgacaaccatcggtgaaactccacct
ccagtgctggattctgagtacatctttgtggtggtagacttcttaattggagttttaatt
tttgccaccattgtcggtaacataggttccatgatttccaatatgaatgcggcccgggct
gaatttcaatcaagagttgatgctatcaaacagtacatgaattttcgaaatgtaagcaaa
gatatggaaaagagggttattaaatggtttgactacctgtggaccaacaaaaaaacagtg
gatgagagagaagtcctgagatacctccctgacaaactaagggcagaaattgccatcaac
gttcatctagacacattaaaaaaggttcgcatctttgctgactgtgaagctggtctgttg
gtggagttggtgttgaaactacaaccccaggtgtatagtcccggagattacatatgcaag
aaaggggacatcgggcgggagatgtacatcatcaaggaaggcaaacttgctgtggtggca
gatgacggagttacacagtttgtggtgttgagtgacggcagttactttggtgagatcagc
attcttaatatcaaaggcagcaaggctggcaaccgaagaacagccaacattaagagcatt
ggctactcggacctgttctgcctctccaaagatgacctcatggaagctcttacggagtac
ccagatgccaaaactatgctggaggagaaagggaggcagatcttaatgaaagatggtctg
ctggatataaacattgcaaatatgggcagcgaccctaaagacctggaagagaaggtcact
cgaatggagggttcagtggacctcctgcaaacgcgatttgcccgtatcttggctgaatat
gagtcgatgcagcagaaactcaagcaaagattaaccaaggtcgagaaatttctgaaaccg
cttattgaaacagaattttcagctctggaggaacccggaggggaaagtgagctcacagag
tctctacaggactga
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