Mus caroli (Ryukyu mouse): 110294812
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Entry
110294812 CDS
T05910
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110294812 (Ddx54)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110294812 (Ddx54)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Helicases
110294812 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
110294812
NCBI-ProteinID:
XP_021018956
Ensembl:
MGP_CAROLIEiJ_G0027665
UniProt:
A0A6P5PY27
LinkDB
All DBs
Position
5:113569045..113583807
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AA seq
875 aa
AA seq
DB search
MAAGRRVGLGPSSRPTMAPWKKKRLRKRRTGASQGRDSDSDDGEFEIQAEDDARARKLGP
GRALPSFPTSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPMILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDAKLNEQLKTSFLLVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLTGQ
GVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSVTLARPHEEPSGAVGRDGVLG
RVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQQYVRSRPAPSPESIKRAKELDLAE
LGLHPLFSSCFEEGELQRLKLVDSIKNYRTRTTIFEINASSKDPSSQMMRAKRQRDRKAV
ASFQQRRQERQEGPADPAPQRELPQEEEEEDDDMVETVEGVFTEVVGQKRLRPGPSQGAK
RRRIETRQRDQEFYVPYRPKDFDSERGLSVSGAGGAFEQQVAGAVLDLMGDEAQNMSRGQ
QQLKWDRKKKRFVGQSGQEDKKKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGP
SNQRGPGPRRGGKRGRSQGTSQPRASSVPAGRMRSELKTKEQILKQRRQAQKQRFLQRGG
LKQLSARNRRRAQELRQGAFGRGAPSRKGKMRKRM
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggcagacgtgtgggacttggcccgtcgtcgcgtcccaccatggcgccgtgg
aagaagaagaggctgcggaaacgccgaactggggcttcccagggccgcgacagcgactcg
gatgacggcgagttcgagatccaggcggaggatgacgcccgggcgaggaagctgggccct
ggcagagccttgccctcatttcctacctcagagtgcgtatcagatgtggagcccgacacc
cgggagatggtgcgagcccagaacaagaaaaagaagaagtctggaggcttccagtccatg
ggcctgagttaccctgtgttcaaggggatcatgaaaaagggctacaaggtgccgacaccc
atccagaggaagaccatccccatgatcttggacggtaaggatgtggtggccatggcccgg
acgggcagtggcaagacggcctgcttcctcctcccgatgtttgagcggctgaaggcacgc
agtgcacagacgggggctcgggccctcatcctctcacccacccgggagctggccctgcag
accatgaagttcactaaagagctaggcaagttcaccggcctcaagactgccttgatcctg
ggtggagacaaaatggaagaccagtttgcagccttgcacgagaaccctgacataatcatc
gccacccctgggcgtctggtgcatgtggctgtggagatgaacttgaagctgcagagtgtg
gagtatgtggtgttcgatgaagcagacaggctctttgaaatgggctttgctgagcagcta
caggagatcataggccgccttcctgggggccaccagacggtgctgttctcagccacactg
cctaagctgctggtggaatttgcacgggcaggcctcacagagcccgtgctcatccgcctg
gacgtggatgccaagcttaatgagcagctcaagacctccttcctccttgtgcgcgaagac
accaaggctgccgtgctcctctacctgctgcagaacgttgttcggccccaggaccagact
gtggtgtttgtagccacaaagcaccatgcggagtacctcacagagttgctgacgggccag
ggcgtgagttgcgcccacatctacagtgccttggaccagacggcccgcaagatcaacttg
gccaagttcacacacaacaaatgttccaccctcatcgtgactgacctggccgcccggggc
ctggacatcccactgctggacaacgtcatcaactacagcttccctgccaagggcaagctc
ttcctgcaccgagtaggccgtgtggcccgagcaggccgaagtggcacagcctattccttg
gtggccccagacgaggtcccctacctgcttgacctacacctgttcctgggccgctctgtc
accctggcccgtcctcatgaggagccttcaggtgcggttggcagggacggagtgctgggt
cgcgtgccccagagtgtagtggatgatgaggacagcagcctgcagaccgccatgggggca
tccctggaccttcagggcctgcaccgcgtggccaacaacgctcagcagcagtacgtgcgc
tcacggccagcgccctcgcctgagtccatcaagagagccaaggagctggacctggcagag
ctgggcttgcacccgctcttcagctcatgctttgaggagggagagctccaacgcctgaag
ctggtggacagcatcaagaactatcgcacgcgcacaaccatctttgagatcaatgcctcc
agcaaggacccaagcagccaaatgatgcgtgccaagcggcagagggaccggaaagctgtt
gccagtttccagcagcggcgccaggaaaggcaggaaggcccagctgacccagccccccag
agggagctgcctcaggaggaggaagaggaggacgatgacatggttgagactgtagagggt
gtcttcacagaagtcgtgggccagaaacggctaaggccgggacccagccaaggagccaag
aggcggaggatagagacccgtcagcgagaccaggagttttatgtcccctaccggcccaag
gatttcgacagtgagcgggggctgagtgtcagtggggctggaggggccttcgagcagcag
gtggctggtgcagtcctggacctgatgggggatgaagcgcagaacatgagccgggggcag
cagcagctcaagtgggaccggaagaagaagcggtttgtggggcagtcaggccaagaagac
aagaaaaagatcaagacggagagcggccggtttatcagcagttcttataagcgggatctc
taccagaagtggaagcagaagcagaaaattgatgaccgggactccgaagaagaagggcca
tccaaccagcgaggccctgggccccgcagaggtggaaagcgaggtcgtagtcaaggcaca
tcccagccccgagcttccagtgtacccgcaggccgcatgcgctcggaactcaagaccaag
gagcaaatcctcaagcagcgccggcaagcccagaagcagcgcttcctgcagcgagggggc
ctgaagcagctttcagcacgcaaccgccgccgagcccaggagctgcgccagggcgccttt
ggccggggtgcgccctccaggaagggcaagatgaggaaaaggatgtga
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