Mus caroli (Ryukyu mouse): 110294822
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Entry
110294822 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
mcal04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110294822
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
110294822
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcal01009
]
110294822
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110294822
Protein phosphatases and associated proteins [BR:
mcal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110294822
Spliceosome [BR:
mcal03041
]
Common components
Common spliceosomal components
SR proteins
110294822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
110294822
NCBI-ProteinID:
XP_021018967
UniProt:
A0A6P5PSE6
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All DBs
Position
5:complement(136177952..136179036)
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AA seq
283 aa
AA seq
DB search
MSDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRS
RRHSHRRYTRSRSHSHRRGSRSRSYTPEYRRWRSRSHSPMSNRRRHTGSRANPDPNTCLE
VFGLSLYTTEERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERAN
GMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGRRRDSYYD
RGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtagaggagaacaacttcgagggcagagagtctcgctctcagtcaaaatct
ccaacgggaactcctgctcgtgtaaaatcagagagcaggtcaggatctcgtagtccatca
agggtttccaaacattccgaatcccattctcgatcaagatcaaaatccaggtcaaggtca
aggaggcattcgcatagacgctacactcgatccaggtcacactctcataggagaggatct
cggagtaggtcctatacacccgagtataggcggtggaggagccggagtcactctccaatg
tctaatcgcagaaggcatactggcagcagggcaaacccagatcctaacacttgcttggaa
gtatttggcctcagtttgtacacaacagaggagagagatcttcgtgaagtgttttctcga
tatggacctctgagtggtgttaatgtagtttatgatcagcgaactggaaggtcacgtgga
tttgcttttgtgtattttgagagaatagatgactctaaggaggctatggagagagcaaat
gggatggagctggacggtagaagaatccgtgtggattattctatcaccaagagagcgcac
acacccacaccaggcatttacatgggcagaccaactcatagcggtggtggaggtggcgga
ggaggaggtggtggcggcggaggtggtggaggtggcagacgacgagattcttactacgat
agaggatatgatcgaggctatgacagatacgaagattatgattaccggtacagaagaagg
tcgccctctccttactacagtcgctacaggtcacgatcaagatcccgttcctatagtcca
agacgctattga
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