Mus caroli (Ryukyu mouse): 110294827
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Entry
110294827 CDS
T05910
Symbol
Rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110294827 (Rnf6)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110294827 (Rnf6)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110294827 (Rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110294827
NCBI-ProteinID:
XP_021018974
Ensembl:
MGP_CAROLIEiJ_G0028024
UniProt:
A0A6P5PLT3
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All DBs
Position
5:complement(139775265..139786817)
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AA seq
692 aa
AA seq
DB search
MTDALNLYMFFKQETRSLRMNPSRSRSGSSGEEISFQENERRWQQERLHREEAYYQFINE
LSDEDYRLMRDHNLLGTPGEITSEELQQRLERAKEQLASQPGSDSAASNGDSESLRAHSD
EDSLLRWLNTFRRTGNVTRSGQNGNQSWRAVSRTNPNSGEFGFSLEIHINPDNRGSEMHG
EDSTDIPLSGVNREHRQQRPSSPVARRTRSQTSMSSSGGGSSVPRGRRGARRQGSVQGSF
ATLGRLRNGIGVAFGVPRVSAPRTNIINSHTNQSDGSSLRQGGRQRFGAAHIWENGARSN
VTVRNTNQRLEPIRLRPAFSSRSRSPIQRQNGTAHHNSQRQGRPLQQTGRNRSVRHRGVT
RVFLEQGRERRGTDYTPLSNSRLVSRITVEEGESSRSSAATQRHPAITLDLQVRRIRPGE
TRDRDSIANRTRSRAGLAESTVESTSGGFHRTISHLERSGVRTYVSTITVPLRRISENEV
VEPSSVALRSILRQIMTGFGELSSLMEVEPASENQSNGQRLPEVYLELSNGDAADDSGQH
GRASSQASQAQEDNAEMLAVREPTSPQALPSGSRSRRQLGRADNVVEAGTLPILRLAHFF
LLNEGDDDPIRGLTKEQIDNLSTRSYEQNGVDSELGKVCSVCISDYVAGNKLRQLPCLHE
FHIHCIDRWLSENCTCPVCRRPVLEFGATNSG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcattgaatttgtacatgttctttaaacaggaaactagaagtctcaggatg
aatccatctagatctagatcaggtagtagtggagaagagatctcatttcaagaaaatgag
agaagatggcagcaagaacgtctccacagagaagaagcctattatcagtttattaatgag
ctcagtgatgaagattatcggctaatgagagaccataatcttttaggcacccctggagaa
ataacatcagaggagctgcagcagcgcttagagagagcaaaggaacagctggcatctcag
cctggctccgacagcgcggcgagtaatggagactcagaaagccttagagcacattcagat
gaggactctctgctgcgatggctgaatacctttcggcgcactgggaatgtgactcgaagc
ggacagaatgggaaccaaagctggagggccgtgagtcgaacaaacccgaacagtggcgag
ttcgggtttagcctggaaatccacataaaccctgacaacagaggttctgaaatgcatgga
gaggactcgacggacatccctctgtcaggtgttaacagagagcataggcagcaaagacca
tccagtcctgtggctaggcgaaccagaagccagacctccatgagctccagtggtggtggc
tccagtgttcctaggggcaggcgtggtgcgaggaggcagggttctgtgcaagggtcattc
gcaaccctgggaaggttaaggaatggaattggagtagcctttggtgttcccagagttagt
gcccctcgcactaacattattaactctcacaccaaccagtcagatggtagttctctcagg
caaggtggacggcagcggtttggagcagcacatatttgggaaaacggggctagaagtaac
gttacagtgaggaacacaaaccaaagattagagccaataagattacgtcctgctttcagt
agtcgaagccggtcccccattcagagacagaatggtactgctcatcataattcccaaagg
cagggtagaccactacagcaaacgggtagaaacaggtctgttaggcacagaggtgtaacg
cgggtctttttagaacaaggtagagaacgcagaggtaccgattatacccccctgtccaac
tcaagacttgtgtcaagaataacagtagaagagggagagtctagcaggtcctcagctgcc
acccagcgtcatccagcaatcacactggacctgcaagtcaggaggattcggcctggagaa
acgagagatagggatagcattgcaaatagaacccgatctagggcggggctggcagaaagt
acggttgagagcaccagtgggggcttccacagaactatctctcacttagagcgctcaggt
gtccgaacctacgtgagtaccattacagttcctcttcgcaggatttctgagaatgaggtg
gttgagccatcctccgtggctcttcggtcaattttaaggcagatcatgactgggtttgga
gagctgagttctctaatggaggtggagcctgcgtcagagaatcaaagcaatggccaacgt
ttaccagaggtgtacctagaactgagtaatggagatgcagccgatgacagtggtcagcat
ggaagagcatcctcacaggccagtcaggcccaggaggacaatgctgaaatgctagctgtg
agggagcccacctcaccccaggctctccccagtggcagtagaagtagaaggcagttagga
agggcagacaatgtagtcgaggctggaacattacccattctgcgccttgctcacttcttc
ttactgaatgaaggcgatgatgatccaattcgtggtttaaccaaagagcagattgacaat
ctttctaccaggagttatgagcaaaatggggttgacagtgagttaggtaaggtgtgtagc
gtgtgcatcagtgactacgtggctgggaacaagctccggcagctgccttgtctgcacgag
tttcacattcactgtattgatcgctggctgtcggagaactgcacctgccctgtctgtcgg
cggcctgtcttagaattcggagccacaaacagtgggtga
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