Mus caroli (Ryukyu mouse): 110294937
Help
Entry
110294937 CDS
T05910
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110294937 (Ddx55)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110294937 (Ddx55)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Helicases
110294937 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Cas3-like_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
110294937
NCBI-ProteinID:
XP_021019048
Ensembl:
MGP_CAROLIEiJ_G0027755
UniProt:
A0A6P5PRF0
LinkDB
All DBs
Position
5:117563880..117583637
Genome browser
AA seq
466 aa
AA seq
DB search
MLPQRCGRLKPAEKPGRAMEHVTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPL
FMKNKDVAAEAVTGSGKTLAFVIPILEILLKREEKLKKNQVGAIVITPTRELAIQIDEVL
SHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCV
KSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVR
ISVKEKGVAASSTQKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEY
YGKALEALLKKVKILCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQ
YDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTID
LLPKLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKGLQL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgcagcgttgcgggcgactgaaaccagcagagaagccgggccgcgccatggag
cacgtgacggagggtgcctgggagtcgctgcaggtgccactgcaccctcgggtgctcggt
gcactgcgcgagttgggcttcccgcacatgacgccggtgcagtctgcaaccatccctctg
ttcatgaaaaacaaagatgttgccgcagaggctgtgacgggtagtggaaaaaccctggcc
tttgtcatccccattctggagattcttctgaaaagggaggagaagttaaagaagaaccag
gtaggagccattgtcatcaccccgactcgcgagctggccattcagattgatgaagtcctg
tcacacttcacgaagcactttccgcagttcagccagattttgtggattggaggccggaac
cctggagaagatgtggagaggttcaagcagcacggcgggaacatcattgtggcaacccct
gggcgactggaggacatgttccggaggaaggctgagggtctggacctggccagctgtgtg
aagagcttggatgtgctggtgctggacgaggcagacagactgctcgacatgggctttgag
gcaagcataaacacaatcctagagtttttgccaaagcagagaagaacaggcctcttctca
gccacacagacacaggaagtggagaacttggtgcgagcaggcctccggaaccctgtccga
atctctgtgaaggagaagggtgtggcagccagcagtacccagaagaccccgtctcgcctg
gagaaccactatatgatctgtaaggcagatgagaaattcaaccagctggtccatttcctt
cggagccgtcagcaggagaagcacctggtcttcttcagcacgtgtgcgtgtgtggaatac
tatgggaaggccctggaggcgctgttgaagaaagtgaagatcctgtgcatccatgggaag
atgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtgggatcctg
gtgtgcactgacgtgatggcccggggaattgatattcccgaagtaaactgggttttgcag
tatgaccctcccagcaatgccagtgccttcgtgcatcgatgtggacgcacagcccgcatt
ggccatggtggcagtgccctggtgttcctgctgcccatggaggaggcctacatcaacttc
ttggccatcaaccagaaatgccccctgcaggagatgagcctccagagaaacactatagac
cttctgccgaagctccgggccatggctctggctgacagagctgtgttcgagaagggcatg
aaagcctttgtgtcctttgtgcaggcttatgcgaagcacgagtgcagcctcatcttcagg
ctgaagggattgcagctgtaa
DBGET
integrated database retrieval system
