Mus caroli (Ryukyu mouse): 110294996
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Entry
110294996 CDS
T05910
Symbol
Gtf3a
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110294996 (Gtf3a)
03021 Transcription machinery [BR:
mcal03021
]
110294996 (Gtf3a)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110294996 (Gtf3a)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
110294996 (Gtf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-met
zf-C2H2_8
Zap1_zf1
DUF7565
zf-C2H2_ZNF462
zf-H2C2_5
zf-C2H2_2
zf-C2H2_6
zf-C2H2_PRDM15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
110294996
NCBI-ProteinID:
XP_029333679
Ensembl:
MGP_CAROLIEiJ_G0028031
UniProt:
A0A6P7R348
LinkDB
All DBs
Position
5:140524267..140531445
Genome browser
AA seq
472 aa
AA seq
DB search
MQRAKLECEKQATLSHVRLIFGTFKQRFRFPKPRTQSPEPGCLSPCKSPRCACASELHGL
SEHAQSWRVVVRAAFPEVQSLRAPVACVPRSRGPHVAAPRQPGPDRVALEPRVSVAEAVS
SLTIADAFVGACEGPAPPRPALPSRFICSFPDCSASYNKAWKLDAHLCKHTGERPFVCNY
EGCGKAFIRDYHLSRHVLIHTGEKPFVCADDGCNQKFNTKSNLKKHIERKHGNPQKQYVC
SFEGCKKAFKKHQQLRAHQCQHTSEPLFRCTHEGCGKHFASPSRLKRHGKVHEGYLCQKG
CSFMGKTWTELLKHMREAHKEDITCTVCQRTFKRRDYLKQHMKTHAPERDVYRCPRQGCG
RTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMKQSLMRHSVVHDPDKKRMKLKVRA
PRERRSLASRLSGYFPPKRKQEPDYSLPNASAESSSSPEAQLPPPAALLIVC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggcaaaactggaatgtgaaaaacaggccaccttaagtcatgtcaggttgata
tttgggacgtttaagcagcgcttccgtttccctaagccgcgaacccagagcccagagcct
ggctgcctctcgccgtgcaagagtcctcgatgcgcatgtgcaagcgagctccacggcctc
tcggagcatgcgcagtcgtggcgcgtggtggtgcgggccgcgttcccggaagttcaaagt
ctccgggcgccggtggcttgcgtcccgcgttcccggggaccgcacgtggctgccccgcgt
cagcccgggcccgatcgtgtcgccctggagccgcgggtgtcagtcgcggaagcggtgtcg
tcgctgaccatcgcggacgcgttcgtcggggcctgtgagggccccgcgccgccgcgcccc
gcgctgcccagcaggttcatctgctcttttcccgactgcagcgccagttacaacaaagcc
tggaagctagacgcgcacctatgcaagcacacgggggagaggccatttgtttgcaactat
gagggctgtggcaaggccttcatcagagactaccatctgagccggcatgtcctgattcac
actggggaaaagccgtttgtttgtgcagatgatggctgtaatcagaaattcaacacaaaa
tcaaacttgaagaaacacattgaacgcaaacatggaaatccacaaaaacagtatgtgtgc
agttttgaaggttgcaagaaggcctttaagaagcaccagcagctgagagcccatcagtgc
cagcacaccagcgagccgctctttaggtgtacccacgagggatgtgggaagcactttgcc
tcgcccagcaggctgaaacggcatgggaaagttcacgagggctacctgtgtcaaaaggga
tgttcttttatgggaaaaacgtggacagagcttctgaaacacatgagagaagcccataaa
gaggacataacctgcactgtatgtcagaggacgttcaagcgcagagattaccttaagcag
cacatgaagactcacgccccggaaagggatgtgtaccgctgtccgcggcaaggctgtgga
agaacctacacaaccgtgttcaacctgcagagccacattctctccttccacgaggaaaag
cgcccatttgtgtgtgagcatgctggctgtggcaagacatttgcaatgaaacagagtctc
atgaggcacagtgtcgtgcatgatcccgacaagaagaggatgaagctcaaagtaagagcc
cctcgggagagacgcagcttggcctctcgcctcagtgggtacttccctcctaagaggaaa
caagagcccgactactcattgcctaacgccagtgcagagtccagcagcagcccagaggcc
cagctacccccgccagccgccttactcattgtctgctag
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