KEGG   Mus caroli (Ryukyu mouse): 110294999
Entry
110294999         CDS       T05910                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03020  RNA polymerase
mcal03420  Nucleotide excision repair
mcal04623  Cytosolic DNA-sensing pathway
mcal05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110294999
  09124 Replication and repair
   03420 Nucleotide excision repair
    110294999
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110294999
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110294999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110294999
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110294999
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110294999
  RNA polymerase III system
   RNA polymerase III
     110294999
  RNA polymerase I system
   RNA polymerase I
     110294999
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110294999
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Cytochrome_C7 DmmA-like_C DZR Zn_ribbon_13 FtrD-like HypA MCM_OB
Other DBs
NCBI-GeneID: 110294999
NCBI-ProteinID: XP_021019095
UniProt: A0A6P5PSL7
LinkDB
Position
5:complement(142185899..142186652)
AA seq 60 aa
MDTQKDVRPPKQQPMIDICGECHTESDIKSRDPIKCRKCGYRIMYKKRTKRLLMFDANGG
NT seq 183 nt   +upstreamnt  +downstreamnt
atggacacccagaaagatgttcgaccaccaaagcagcagccaatgatagatatttgtgga
gagtgtcacactgaaagcgacataaaatccagggatccaatcaaatgcagaaaatgtgga
tacagaataatgtacaagaaaaggacgaaaagattgctaatgtttgatgcaaatggtggt
taa

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