Mus caroli (Ryukyu mouse): 110295015
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Entry
110295015 CDS
T05910
Symbol
Setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00310
Lysine degradation
mcal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110295015 (Setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110295015 (Setd1b)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110295015 (Setd1b)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110295015 (Setd1b)
HMT complexes
COMPASS/SET1 complex
110295015 (Setd1b)
COMPASS/SET1 complex (yeast)
110295015 (Setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110295015
NCBI-ProteinID:
XP_021019117
Ensembl:
MGP_CAROLIEiJ_G0027720
UniProt:
A0A6P5PMA8
LinkDB
All DBs
Position
5:116158981..116183041
Genome browser
AA seq
1984 aa
AA seq
DB search
MENSHPHHHHQQPPPQPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLAMSS
NRPVEIVEDPRVVGIWTKNKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNVRENFLRD
MCKKYGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNIIHVELDTK
GETRMRFYELLVTGRYTPQTLPVGELDAISPIVSETLQLSDALKRLKDGSLSAGCGSGSS
SVTPNSGGTPFSQDTAYSSCRLDTPNSYGQGTPITPRLGTPFSQDSSYSSRQPTPSYLFS
QDPTATFKARRHESKFTDAYNRRHEHHYVHNSAVAGATAPFRGSSDLSFGTVGSSGTPFK
AQSQDATTFAHTPPPAQTATASGFKSAFSPYQTPAPPFPPPPEEPTATAAFGSRDSGEFR
RAPAPPPLPPAEPPAKEKPGTPPGPPPPDSNSMELGGRPTFGWSPEPCDSPGTPTLESSP
AGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDTEIQMEGSPISSSSSQLSPLSHFGTN
SQPGFRGPSPPSSRPSSTGLEDISPTPLPDSDEDEDLGLGPRPPPEPGPPDPMGLLAQTA
EVDLDLAGDRTPTSERMDEGQQSSGEDMEISDDEMPSAPITSADCPKPMVVTPGAGTVAA
PNVLAPNLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLP
APPGVPPPPILPPMPPFPPGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQMLSRLMTGQGA
CPYPPFMAAAAAAASAGLQFVNLPPYRSPFSLSNSGPGRGQHWPPLPKFDPSVPPPGYIP
RQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKERMAKASLTPV
KSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSFKVKRKEPPD
TASSGDQKRLRPSTSVDEEDEESERERDRDIADAPCELTKRDPKSVGVRRRPGRPLELDS
GGEEDEKESLSVSSSSSASSSSESSTTSPSSSASDKEEEDRESTEEEEEEEEEEAEEEEE
EGLRSRISSPSSSSSSDKDDDDDEDSDGQIDSDIGDQGAPLSEASEKDNGDSEEEETESI
TTSKAPAESSSSSSESSGSSEFESSSESESSSSSSEDEEEMTVPGVEEEEDEEEEEEEEE
EKETAMAAATVVAMAEESMPPAGGQDFEQVRAEVPLGPRGPMRESLGTEEEVDIEAEDEV
PEMQAPELEEPPLPMGARELEGSPEPLEEPSPNTQGDMLLSPELPARETEAQPPSPPEHG
PESDLDVEPEPPPMLSLPLQPPLPPPRLLRPPSPPPEPETPEPPKPPVPLEPPPEDQPPR
TPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPSPSPGLSSGGL
PRTPGRDFSFTPTFPEPSGPLLLPVCPLPTGRRDERTGPLASPVLLETGLPLPLPLPLPL
PLALPVPVLRAQPRPPPQLPPLLPATLAPCPTPIKRKPGRPRRSPPSMLSLDGPLVRPPP
GPALGRDLLLLPGQPPAPIFPSAHDPRAVTLDFRNTGIPAPPPPLPPQPPPPPPPPPVES
TKLPFKELDNQWPSEAIPPGPRRDEVTEEYVDLAKVRGPWRRPPKKRHEDLVAPSASPEP
SPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGMDWLNDTLWVYH
PSTSLSSAKKKKREDGIREHVTGCARSEGFYTIDKKDKLRYLNSSRASTDEPPMDTQGMS
IPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLF
AMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFAR
FINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCR
GTLN
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtcacccccaccaccaccaccagcagcccccgccgcagcccggcccttcg
ggcgagaggaggaaccaccattggagaagttacaagttgatgattgacccggctctgaaa
aaggggcaccataaactgtaccgctacgatgggcagcatttcagcctggcgatgtccagc
aaccgcccggtggagatcgtggaagatccccgggtggtcggaatctggaccaaaaacaag
gagctggagctgtctgtgcccaaattcaagatcgatgagttctacgtgggccctgtgcct
ccaaagcaggtgacatttgccaagctgaatgacaacgtccgtgaaaacttcctaagggac
atgtgcaaaaagtatggggaggtggaggaggtggagatcttgtataacccgaagaccaag
aaacacctgggcattgccaaggtggtctttgccacagtcaggggcgccaaggaggccgtc
cagcacttgcacagcacttctgtcatgggcaacattatccacgtggagctggacaccaaa
ggggaaacccgcatgcgcttctacgaactgttggtcaccggccggtacacccctcagacc
ctccctgtgggggagctggatgctatttctccaattgtgagcgagaccctgcagctatca
gatgctctgaagcgcctcaaggatggcagcctgtctgcaggctgcggctctggctcctcg
tcagtcacccccaatagcggtgggacccccttctcccaggacacagcttactccagctgc
cgcctggacacacccaactcctatggacaaggcaccccaatcacacctcgcctgggtacc
cctttctcccaggattccagctactccagccgtcagcccacaccctcctatctcttcagc
caggaccccacagccacgttcaaggcgaggcggcatgagagcaagttcacagatgcctac
aaccgccgccacgaacatcattatgtccacaactcagcggtggctggagccacagctcct
ttccgaggctcctcggacctctcttttgggacagttggcagcagcgggactcccttcaag
gctcagtcccaggatgccaccacgtttgcccatactccacctcctgcccaaacagccacg
gcttctggattcaaatcggctttctctccataccagactccagcaccgcccttcccgcca
ccccctgaggagcccaccgccacagcagcctttgggagccgcgacagtggggagttccgg
agggcacctgcgcccccacccctgccacccgctgaacctccagccaaggagaagccaggc
acccctcctggtcccccgccccctgacagcaacagcatggagctgggtggtcggcctacc
tttggctggagtcctgagccctgtgacagccctggcacccctactctggagtcctctcca
gcgggaccagagaagccccatgacagcctggactcccgcattgagatgctgctgaaggag
caacgcaccaagctgcccttccttcgtgagcaggattcagacactgagatccagatggaa
ggcagccccatctcctcctcctcctcccaactctccccgctcagccactttggcactaac
tcgcagcccggcttccgcggtccctcgccaccctcctcgcgcccctccagcacaggccta
gaggacatcagccccacaccactgcctgactctgatgaagatgaggacttgggcctgggg
cctcggcccccacctgagccaggccccccagaccctatgggtctgctagcccagacagct
gaggtggatttggacctggcaggagacaggacccccacctcagagcggatggatgagggc
cagcagtcctcaggagaggacatggaaatctcagatgatgagatgccctcggcccccatc
accagcgctgactgccccaagcccatggtggtgaccccaggggccgggactgtggcagcc
cccaacgttctggctccaaacctgcccctgcccccaccccctggcttccctccattacct
ccgccccctcccccacccccaccacaacctggcttccccatgcccccacctctgcctcca
ccaccaccaccaccaccaccagcccatcctgcagtgacagtgcccccgccacccttgcca
gcgcccccgggtgtcccgcccccacccatccttccgccgatgccgcccttcccaccggga
ctgtttcctgtgatgcaggtggacatgagccatgtgctgggtggccagtggggtggcatg
cccatgtccttccagatgcaaacacagatgttaagccggctcatgacgggccagggtgct
tgtccctacccacctttcatggccgctgcagctgccgctgcttctgctgggctgcaattt
gtcaacttgcccccctaccggagccccttctccctaagcaacagtggcccaggacgtgga
cagcactggccgcccctgcccaagtttgacccttccgtgccgccaccaggctacatacca
cgtcaggaggacccacacaaggccacggtggacggggtcttgctcgtagtgctcaaggaa
cttaaggccatcatgaagcgtgatctcaaccgcaagatggtagaggtggtggccttccga
gcctttgacgaatggtgggacaagaaggagcggatggccaaggcctcactgacccccgtg
aagtccggtgagcacaaggacgaggacaggccaaagcccaaagaccgaatcgcctcctgt
ctgctggagtcgtggggcaagggtgagggcctaggttacgagggcctaggcctgggcatt
ggactgcggggcgccattcgcttgccctccttcaaggtcaagaggaaggagccaccggac
acagcctcttctggtgaccagaagcggctgcggccttcaacctctgtggatgaggaagat
gaagagtcagagcgggagcgggaccgggacatagctgatgccccctgcgaactcaccaag
cgggaccccaaaagcgtgggtgtgcgacgccggccaggacggcccctcgagctggacagc
ggcggggaggaggatgagaaggagtccttgtccgtgtcctcctcttcctcagcgtcgtca
tcctctgaatcttctaccacctcaccctcatcctccgcctcagacaaggaagaggaggac
cgagaaagcaccgaggaggaggaggaggaagaggaggaggaagcagaggaagaggaggag
gaaggcctcaggagccgcatatcctcaccctcgtcctcctccagctccgacaaggatgac
gacgacgatgaggacagcgatggccagattgattctgacatcggtgatcagggtgccccc
ctgtcggaggccagcgagaaggacaatggagattctgaggaggaggagacagagagcatc
accacctcaaaggccccggctgagtcgtcctcatcctccagtgaaagttctggatcttca
gagtttgaatccagttccgagtccgagtcttcatcttcatcctcagaggacgaggaggag
atgaccgtacctggggtggaggaagaagaggacgaggaggaggaggaggaggaagaggag
gagaaagagactgcaatggctgcagccacggtagtggctatggccgaagagagtatgcct
ccagcgggtggccaggactttgagcaagtcagggcagaagtgcctctgggcccacgaggc
cccatgagggagtccttgggcactgaggaggaagtggacattgaggctgaggacgaagtc
cctgagatgcaggctcccgagctggaggagcctccgttgcccatgggtgctcgggagctg
gaagggagcccagagcccctagaagagccaagccccaacacacaaggggacatgctgctc
tctccagagctccctgcccgggagacggaggctcaacccccatcaccgcctgaacatggt
ccagagtcagacctggatgtggagcccgagccccctccgatgctctccttgcccttgcag
ccgccattgccgccccctcgactgctccggccacccagcccaccgcctgagcccgagacc
ccagagccccccaaacctcccgtccccctggagcctcccccagaagaccagccgccacgt
accccaggcctctgtggcagtctggccaagtcacagagcacagagacagtgccagccacc
ccaggtggggagcccccactgtcagggggcagcagtggcctgtccctgagctccccgcag
gtgcctggcagcccgttctcctatccatccccgtcccccggcttgagcagtgggggactt
ccacggacacctggtcgggacttcagcttcacacctactttccctgagcccagtggaccc
ttacttctgcctgtctgtcccctcccaaccggtcggcgagatgagcgtactggccccctg
gcctccccagtgctcctggaaactggccttcccctcccacttcccctgcctctgccctta
cctctggcattgcctgtcccggtcctgagggcccagcctcggccacctccccagctgcct
cccctgctgcccgctactctagctccctgcccaacccccatcaagaggaagccaggccgg
ccccggagatccccaccgtccatgctgtccttggatgggcctttggtccggccaccgcca
ggacctgcccttgggagggaccttctgctcctgccaggccagccaccggcccccattttc
cccagcgcacatgaccctcgggccgtgaccttggacttccggaacacggggatcccagcc
cccccaccccccctccccccccagcctcccccacctccacccccaccacccgttgaatcc
accaagctaccctttaaggagctggacaaccagtggccctctgaagctatccccccagga
cctcgccgagatgaggtcactgaagagtacgtggacctggccaaggtgcggggaccgtgg
cggcggccacccaagaagcggcacgaagacctggtggccccatcggcctcacctgaaccc
tcaccaccccagcctctcttccggccccgctcagagtttgaggagatgaccatcttgtac
gacatctggaacggtggcatcgacgaggaggacatccgcttcctgtgtgtcacctacgag
cgcctgctgcagcaggacaatggcatggactggctgaatgacacactctgggtctaccat
ccctctaccagcctctcctcagccaagaaaaagaaacgggaagatggtatccgtgagcac
gtgacaggctgcgcccgaagtgagggcttctataccatcgacaagaaggacaagctgaga
tacctcaacagcagccgtgccagcacagacgagccccccatggacacccagggtatgagt
atcccagcccagccccatgcctctactcgggcaggctcagagcggcggtctgagcagagg
cgcctcttgtcctccttcaccggcagctgtgacagcgacctgctcaagttcaaccagctc
aagtttcggaagaagaaactcaaattctgtaagagccacattcatgactggggcctgttt
gccatggagccaattgctgctgacgagatggtcatcgagtacgtgggccagaacattcgc
caggtgattgcggacatgagggagaaacggtatgaggatgaaggcatcggtagcagctac
atgttcagagtagaccacgacaccatcatcgacgccaccaagtgcggcaactttgcacgc
ttcattaatcacagctgcaatcccaactgctacgccaaggtgatcacggtagagtcccag
aagaagattgtcatctactctaagcagcacataaatgtcaacgaggagatcacgtacgac
tacaagttcccgatcgaggacgtcaagatcccctgcctctgtggctccgagaactgccgg
gggaccctcaactag
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