Mus caroli (Ryukyu mouse): 110295170
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Entry
110295170 CDS
T05910
Symbol
Msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110295170 (Msx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110295170 (Msx1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110295170 (Msx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
110295170
NCBI-ProteinID:
XP_021019315
Ensembl:
MGP_CAROLIEiJ_G0027173
UniProt:
A0A6P5PS00
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All DBs
Position
5:complement(32691863..32695684)
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AA seq
303 aa
AA seq
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MAPAAAMTSLPLGVKVEDSAFAKPAGGGAGQAPGAAAATATAMGTDEEGAKPKVPASLLP
FSVEALMADHRKPGAKESVLVASEGAQAAGGSVQHLGTRPGSLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKLDRTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
AAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgctatgacttctttgccactcggtgtcaaagtggaggactctgcc
ttcgccaagcctgctgggggaggcgctggccaggcccccggggctgctgctgccaccgca
accgccatgggcacagatgaggagggggccaagcccaaagtgcccgcttcactcctgccc
ttcagcgtggaggccctcatggccgatcacaggaagcccggggccaaggagagcgtcctg
gtggcctctgaaggggctcaggcagcgggtggctcggtgcagcacttgggcacccggccc
gggtctctgggcgccccggatgcgccttcctcgccgcggcctctcggtcatttctcagtc
gggggactcctcaagctgccagaagatgctctggtgaaggccgaaagccccgagaaacta
gatcggaccccgtggatgcagagtccccgcttctccccgcccccagccagacggctgagt
cccccggcatgcaccctacgcaagcacaagaccaaccgcaagcccaggacgcctttcacc
acggctcagctgctggctctggagcgcaagttccgccagaagcagtacctgtctattgcc
gagcgcgcggaattctccagctcgctcagcctcaccgagacccaggtgaagatctggttc
cagaaccgccgcgctaaggccaagagactgcaggaggcggagctggagaagctgaagatg
gccgcgaagcccatgttgccgcctgctgccttcggcctctcctttcctcttggcggtcct
gcagcggtggctgcagctgcgggcgcctcactctacagtgcctctggccctttccagcgc
gccgcgctgcctgtagcgcccgtgggactctacactgcccatgtaggctacagcatgtac
cacctgacttag
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