Mus caroli (Ryukyu mouse): 110295398
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Entry
110295398 CDS
T05910
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110295398 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110295398 (Lhx5)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110295398 (Lhx5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
110295398
NCBI-ProteinID:
XP_021019575
Ensembl:
MGP_CAROLIEiJ_G0027657
UniProt:
A0A6P5PNA2
LinkDB
All DBs
Position
5:113383922..113392724
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AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgctggctgtgagcggcccatcctcgaccgctttctgctgaacgta
ctagaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcccgggaaggcaagctatactgtaaaaacgactttttcaggcgcttt
ggcacaaagtgtgcaggctgtgcgcaaggtatctctccgagcgacctggtacggaaggct
cggagcaaagtcttccacctcaactgcttcacctgtatggtatgcaacaagcagctatcc
accggagaggagctctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagcctcaaggagggaagtctcaactcagtgtcgtcctgtacggaccgcagt
ttgtccccggacctccaggatccgttacaggacgaccccaaagagaccgacaattcgacc
tcatcggacaaggaaaccgctaacaacgagaatgaggagcagaactccggcaccaaacgg
cgcggcccgcgcaccaccatcaaggccaagcagctggagacgctcaaggcagcctttgca
gccacgcccaagcccacgcgccacattcgcgaacagctggcacaggagacgggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcgcggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatacacttattacgga
gactaccaaagtgactactacgctccgggaggcaattacgatttcttcgcgcacggtccg
ccgtcacaggcgcagtcccctgccgactccagcttcctggcagcatcgggacctggctcg
acaccgctaggcgcgctggaaccgccgctggccgggcctcacggcgcggacaaccccaga
ttcaccgacatgatctcgcacccagacacgccgagccctgagccgggcctgcccggtgcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagtggacccctgtcgcaccccaaccctgagctcaacgaagcggcc
gtatggtaa
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