Mus caroli (Ryukyu mouse): 110295419
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Entry
110295419 CDS
T05910
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X3
KO
K24936
tetratricopeptide repeat protein 28
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110295419 (Ttc28)
Cilium and associated proteins [BR:
mcal03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110295419 (Ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
Rapsyn_N
TPR_14
RPN7
DUF6340
TPR_16
TPR_NPHP3
TPR_6
TPR_9
TPR_19
TPR_17
RMD1-3
ANAPC5
TPR_YpiA_C
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
110295419
NCBI-ProteinID:
XP_021019589
Ensembl:
MGP_CAROLIEiJ_G0027555
UniProt:
A0A6P5PVE5
LinkDB
All DBs
Position
5:103807327..104220780
Genome browser
AA seq
2335 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDT
LEPTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELG
NMGAVYIAMGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHN
CVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASS
NLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALS
NLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALG
NLGDIFICKKDINGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHT
QELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYG
NMGITKMNMNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIK
YYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQ
AYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQ
YHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTV
SYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGIL
KFHEHYLGDNSVESSSDFQAGSSAALPVATSSTLEQHIASVREALGVESYYSRACASSET
ESEAGDIMEQQLEEMNKQLNSVTDPTGFLRMVRHNNLLHRSCQSMTSLFSGTVSPSKDGT
SSLPRRQNSLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLK
GSASNEYLYERFTLIAVPAVRSLGPHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDR
WLWGPMPSAEEEAFMVSELLGCQPLVGSMATKERVMSALTQAECVHFATHVSWKLSALVL
TPNTEGNPAGSKSSFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSV
KLVVLSSSQEANGRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLN
GLKASASLGEAMKVVQSSKAFSHPSNWAGFTLIGSDVKLNSPSSLIGQALTEILQHPERA
RDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASG
LPAAVFFPTSDPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRAVKNMVG
MLHQVLVQLQACEKEQDFASTPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKT
GKQASRRTTHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFS
PTGADSIASDAISVYSLSSIASSMSFVSKPEGGLEGGGPRGRQDYDRFKSTHPQRATLPR
RQTSPQARHGASKEEEEYEGFSIISMEPLATYQGEGKTRFSPDPKQPCVKAPGGVRLSVS
SKGSVSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESTPKLD
PQELAQRILEETKSHLLAVERLQRSGGPASPDREDSMVAPSSTTVFRASETSAFSKPILS
HQRSQLSPLTVKPQPPARSSSLPKVSSPATSEVLGKDGLSPPGSSHPSPGRDTPVSPADP
PLFRLKYPSSPYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSL
KMLWQSTPQPPRGPRKTCRGAPGTLTSKRDVLSLLNLSPRHGKEEGGADRLELKELSVQR
RDEVPPKVPTNGHWCTDTATLTTRSTTAAPRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgccctccagtac
cttggacgtcacgcggacgccctggcagcctttgcatctgggctggctcaagaccccaaa
agtctccagctcctggtgggaatggtggaagctgccatgaagtctcccatgagagacacc
ctggagcccacttaccagcagcttcagaaaatgaaactggacaagagtccctttgtggtc
gtgtctgtggttgggcaggagctcctgacagccggccaccatggggcttccgtggttgtc
ttagaagctgccctgaagattggcacttgcagcctcaaactgagaggctctgtcttctcc
gccctgagcagtgcacactggtctcttggcaacacagagaagagcactgggtacatgcag
caagacttggatgtagccaagaccttaggtgaccagacaggagaatgccgagctcatggg
aacctaggctctgcattcttttccaaggggaattaccgagaggccctcacaaaccacagg
catcagctggtgctcgccatgaagctcaaggaccgggaggcagcatcgtcagcgctgagc
agcctgggtcacgtgtacaccgccatcggcgactaccccaacgcgctggccagtcacaag
cagtgcgtcctcctggccaagcagtccaaagatgacctttctgaagcccgagaactcggg
aacatgggagccgtgtacatcgccatgggtgactttgagaacgccgtgcagtgccacgaa
cagcacctgcggatcgccaaggacctggggagcaagcgcgaggaggcccgtgcctacagc
aacctgggcagcgcctaccactaccggaggaactttgacaaggccatgtcctaccacaac
tgtgtgctggagctggcgcaggagctgatggagaagcccatcgagatgcgagcctacgct
ggcttgggccatgcagccaggtgcatgcaggacctggagagggcaaaacagtaccacgag
cagcagctgggcattgcagaggacctcaaggaccgggcagcagagggccgcgcatcctcc
aatctggggataatccaccagatgaaaggcgattatgacacagccctgaagctccacaag
acccacctgtgcatcgcccaagagctgagcgactatgcggcccaaggccgtgcatacgga
aacatgggcaacgcctacaacgccctgggcatgtatgaccaggctgtcaagtaccaccgt
caagagctgcagatctccatggaagtgaatgaccgcgcctctcaggcatcgactcacggg
aacctggccgtcgcctaccaggccctgggagcccatgaccgggcgctgcagcactaccag
aaccacctgaacatcgcccgggagctgagagacatccagagcgaggcccgggctctcagc
aacctcgggaacttccactgctcccgtggagagtatgtccaggctgcaccctactacgag
cagtacctccgtctcgctcccgacctccaggacatggagggggaagggaaggtctgccac
aacctcggctatgctcactactgccttggaaactaccaggaggcagtgaagtactatgag
caggatctggctctggccaaagaccttcacgacaaactgagccaggcgaaagcctactgc
aacttgggcctggccttcaaggctctgctgaactttgctaaggccgaggagtgccagaag
tacctcctgtccctagcccagtccctggataattcccaggctaagtttcgagccctaggg
aacctgggcgacatattcatctgcaaaaaggacataaacggtgccataaagttctacgag
caacagttgggcttatctcaccatgtgaaagacagacggctggaggccagtgcctacgcg
gccctgggtaccgcctaccgaatggtccagaagtacgacaaggccttgggttaccacaca
caggagctggaggtttaccaggaactgagtgacctgccaggggagtgccgggcccacggg
cacctagcggccgtctacatggccctcggcaaatacacaatggcgttcaagtgttaccag
gagcagctggagctggggcggaagctgaaggagccgagcctggaagctcaggtgtacggc
aacatgggtatcacgaagatgaacatgaacgtgatggaggacgccattggctactttgag
cagcagttggccatgctgcagcagctgagcgggaacgaatctgtgctggacagaggccgg
gcctacggcaacctgggggattgctacgaggccctgggggactacgaggaggccatcaag
tactacgagcagtacctgtctgtcgcccagagtctgaaccgcatgcaagaccaagctaag
gcctaccggggtctaggaaatgggcacagggcgacgggaagcctgcagcaggccctcgtg
tgcttcgagaagaggctggtggtggcccatgagctcggggaggcctccaataaagctcag
gcctacggagagctgggaagcctccacagccagttagggaactatgagcaagccatctct
tgccttgaacgccagctgaacattgccagggacatgaaggaccgagccctggaaagtgac
gcggcctgcggcctggggggtgtctaccagcagatgggagagtatgacacagccctgcag
taccaccagctcgacctgcagattgcagaggagacagacaaccccacgtgccagggccgg
gcctacgggaacctgggactcacctacgagtccctgggcaccttcgagagggctgtggtc
tatcaggagcagcacctgagcatcgcggcacagatgaacgacttggtggccaagaccgtg
tcctacagcagcctgggaaggactcaccatgccctgcagaactattcgcaggcagtcatg
tacttacaggaaggcttaaggttagctgaacaactgggtcgaagagaagatgaagcaaaa
attcgccatggtcttggtctctccctttgggcaagtggaaacctggaggaagctcagcac
cagctttacagggcgtcggccttgtttgaaacgattcggcacgaggcacagctgagcaca
gactacaagctctctctcttcgacctgcagacatcatcctaccaggccttgcagcgggtg
ctcgtcagcctaggccaccacgatgaagccctggccgtggcagaaaggggccggacaaga
gcatttgctgacctgctggtggaaagacagacgggacaacaggactccgacccctactca
cccatcaccatcgaccagatcttagagatggttaatgcgcagcggggactagtgctgtac
tactccctggctgcaggctacctctacagctggctgcttgctcctggagcgggaatcctg
aagtttcacgaacattacttgggtgataattcagtggaaagttccagtgatttccaagcc
ggcagcagtgcagccttgcctgtagcaaccagctctacactggagcagcacatcgccagt
gtccgggaggccctgggggtggagtcttactactccagggcctgtgccagcagtgagaca
gaaagcgaagctggagacatcatggaacagcagttggaggagatgaacaagcagcttaac
tcggtaaccgaccccacgggcttcctgaggatggtgcgccacaacaacctcctgcacagg
agctgccagagcatgacaagcttgttcagtggtacggtgtcacccagcaaggatgggacc
tcctctctgcccaggaggcagaactcactggccaagcccccactccgtgccctgtacgat
ctgctcatcgcgcccatggaagggggcctaatgcactccagcggccccgtgggccggcac
cggcagctggtcctggttctggagggggagctctaccttgtcccctttgctctcctgaag
ggcagcgcctccaacgagtacctgtatgaacgctttaccctcatcgctgtgcccgccgtc
cgctcgcttggtccacactccaagtgtcacctgaggaagaccccgcccacatattccagc
tccaccgccatggcggccgtcataggcaaccctaagctcccatcggcagtgatggacagg
tggctgtggggcccgatgccctcggcagaggaggaagcattcatggtgtcagagctcctg
ggatgtcagcccctggtgggcagtatggccaccaaggagagggtcatgagtgccctgacc
caggccgagtgtgtccactttgctacccacgtctcttggaagctgtcggccttggtcctc
acacccaacacggagggcaaccccgcaggcagcaagagctcctttggccacccctacaca
atccccgagtcgctgcgggtgcaggatgacgcgagtgacgttgagagcatctcagactgc
cctccactgcgggagctgctgctcacagcggccgacctcctggacctgcggctgtcagta
aagctggtggtgctcagctcgtcccaggaggccaacggccgcgtcacagcagacggcctg
gtggcgctgacacgggccttccttgccgctggcgcgcagtgtgtgcttgtggctctgtgg
cccgtgccggtcgcggcttccaagatgttcgttcatgccttctactcgtccctgctgaac
ggcctgaaggccagcgcctccctgggcgaggccatgaaggtggtgcagagcagcaaggcc
ttctcacatccctccaactgggcaggtttcacacttatcgggagtgatgtcaagctgaac
agcccctcgtcactcatcggccaagcgctcacggagatcctgcaacacccggagcgggca
cgggacgccctgcgcgtgctactgcacctggtggagaagtccctgcagcggatccagaat
ggacagcgcaatgccatgtatacatctcagcagagcgtcgagaacaaagtgggcggcatc
cctggatggcaggctctcctcaccgcagtgggcttccggctggaccctgcggccagtggg
ctgccggcagccgtcttcttcccaacctcagacccaggcgacaggctgcagcaatgcagt
agcactctccaggccctgctgggtctgcccaacccagccctccaagcactgtgcaaactc
atcacggcctcagagacgggagaacagcttatcagccgggctgttaaaaatatggtggga
atgctccatcaggtgctggttcagctgcaggcctgtgagaaggaacaggactttgcctcg
actcccattccagtctccctcagtgtccagctatggcggctcccagggtgccacgagttc
ctggcagctctcgggtttgacctgtgtgaagtgggccaagaggaagtgatcctgaaaact
ggtaaacaggctagccggcgcaccacccacttcgctctccagtccctgctgtcactcttc
gattccaccgagctccccaagcgcctcagcctggacagttcctcctctctggagtccctg
gcatcggcacagtctgtgtccaatgcgctgcccttgggctaccagcaccctcctttctca
cccacgggcgcagacagcattgcctccgacgccatttctgtgtacagcctcagctcaatc
gcctcctccatgagttttgtctccaagcctgaggggggtttggaaggtgggggtccccga
ggacgacaggactatgataggttcaagagcacccaccctcaacgagccaccctgccacgg
cgccagacgtccccacaggccagacatggggccagcaaggaagaagaagaatatgagggg
ttctccatcatcagcatggagcctctggcaacctaccaaggggaggggaaaacacgcttc
tccccagaccccaagcagccctgtgtcaaggcaccaggtggtgtgaggctttcggtcagc
tccaagggaagcgtcagcactcccaactcccctgtgaagatgaccctaatccccagccca
aactcacccttccagaaagtagggaaactggcaagctcagacacaggtgagtcggaccag
tccagcacagagaccgacagcactgtgaagtcccaggaggagagcaccccaaagctggac
ccccaggagctggcccagaggatcctagaggagaccaaaagtcacctcctggcagttgag
cgccttcagaggagtggtggcccagccagccctgaccgagaagatagcatggtagcaccc
agcagcaccacagtcttcagggcgtcagagaccagcgccttcagcaagcctatcctctct
catcagaggagccagctgtcaccactcactgtcaaaccacagcccccagccaggagctca
tctcttcccaaggtgagcagccctgccacgtcagaggtgttgggcaaagatggcctgagc
cctcctggcagcagccacccatcacctggccgtgacacaccagtctccccagcagacccc
ccactcttcagactcaagtaccccagctctccttacagcgctcacatttccaagtccccc
cggaacacttcccctgcgtgcagcgcgccatctccagcactctcgtactcttcagctggc
tctgctcgatccagtccagccgatgccccggatgagaaggtgcaggccgtgcacagcctc
aagatgctctggcagagcacaccccagccccccaggggcccccggaaaacatgtcgaggt
gcaccgggaaccctgacgtcaaaaagagatgtcctcagcctgctgaacttgtcccctcgg
cacggcaaggaggagggtggggcagacaggctggaactgaaggagctgtctgtgcagcgg
cgtgacgaggtgccacccaaagtccccaccaacggccactggtgcacagatacagcaaca
ctgaccacacgaagcaccacggctgccccgcgccctctgagacttcccttggccaacggt
tacaagttcctgtccccaggaaggctcttcccttcctccaaatgttaa
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integrated database retrieval system
