Mus caroli (Ryukyu mouse): 110295474
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Entry
110295474 CDS
T05910
Symbol
Nkx1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110295474 (Nkx1-1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110295474 (Nkx1-1)
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Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110295474
NCBI-ProteinID:
XP_021019628
Ensembl:
MGP_CAROLIEiJ_G0027114
UniProt:
A0A6P5PVI0
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Position
5:complement(28373954..28377322)
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AA seq
440 aa
AA seq
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MSTSGPAAPGEVPALPPPPPGPGSGPAPPAPAATARDTMDGRAELPIFPRAGVPPLAASD
TVPAVPEGAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAAC
VAVPTASGRSPRAELERRALSAATGVAAAAGAEPTSAGDSYRADEAEANGYSSGSGHSPT
ADSEDEAPEDEDEEEAPEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASPVDDTAAPG
PRGNSPGAPGPPAAATGAGSAGSTPQGAAVATKPKRKRTGSDSKSGKPRRARTAFTYEQL
VALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGG
GPGPGAGPGAGLPGGLSPLSPSPPMGAPLALHGPAGYPAHSPGGLVCAAQLPFLSSPAVL
SPFVLGSQTYGAPAFYAPHL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccagcggcccggcggcacctggggaagtccccgcgctgccaccgccaccgccc
gggcccggctcggggcccgcaccgccggctcctgcggctacagctcgggacactatggac
ggacgagctgagctgcccatctttccccgggctggagtgccaccgctcgcggccagcgac
actgttcccgcggtaccagagggggctggagcggcccggcccgccgcgcccccgcgcccc
acctccttctccgtgttggacatcctagatcccaacaagttcaacagtaggagacgccgc
tgcgtgctactgggccctgtggtgcccgctacgtgtgccccatgcgccccggccgcgtgc
gtcgcggtccccactgcctccggacgttcgccgcgcgcagagctagaacgccgagccctc
tccgccgccacaggagtcgcagcggccgcgggagctgagcctacaagtgctggggactct
tacagggcggacgaggccgaggccaacggctacagcagcggcagcggtcacagcccgacc
gcggacagtgaggatgaagcgccggaggacgaggacgaagaagaagcgcccgaggtgcag
gatgctcagggcaccgaggagcctcggggaggtagcggcggtctcggggcccgcgggtcg
ggctgtcccggagcggccgaggtcgaggcttcccctgtggacgatactgcggccccaggg
ccccgcgggaactcgcccggagccccgggcccgcctgcagctgctacgggagcggggagc
gcggggagcaccccgcagggcgccgccgtggccaccaagcccaagcggaagcgcacgggc
tcggactcgaagtccgggaagccgcggcgtgcgcgcaccgccttcacttacgagcagctc
gtggcgctggagaacaagtttaaggccactcgctacctgtcggtgtgcgagcgcctcaac
ctggcgctgtcgctaagcctcactgagacgcaggtgaagatctggttccagaaccgccga
accaagtggaagaagcaaaacccaggcgctgacaccagcgcgccgaccggcggcggcggg
ggccccggcccgggagcggggcccggcgcggggctgcccggcggcctcagtccgctcagc
ccctcgccgcccatgggcgctccgctcgccttgcacggcccggccgggtacccggcgcac
agccccggagggctggtgtgtgctgcgcagctgcccttcctgtccagcccggccgtgctc
tcgcccttcgtgctgggctcgcagacgtacggcgcgcccgccttctatgcgccccacctc
tga
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