Mus caroli (Ryukyu mouse): 110295504 Help Entry 110295504         CDS       T05910                                  Symbol Col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04151   PI3K-Akt signaling pathway mcal04510   Focal adhesion mcal04512   ECM-receptor interaction mcal04820   Cytoskeleton in muscle cells mcal04926   Relaxin signaling pathway mcal04933   AGE-RAGE signaling pathway in diabetic complications mcal04974   Protein digestion and absorption mcal05146   Amoebiasis mcal05165   Human papillomavirus infection mcal05200   Pathways in cancer mcal05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110295504 (Col4a4)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110295504 (Col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110295504 (Col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110295504 (Col4a4)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     110295504 (Col4a4)   09154 Digestive system    04974 Protein digestion and absorption     110295504 (Col4a4)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110295504 (Col4a4)   09162 Cancer: specific types    05222 Small cell lung cancer     110295504 (Col4a4)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110295504 (Col4a4)   09174 Infectious disease: parasitic    05146 Amoebiasis     110295504 (Col4a4)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110295504 (Col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcal04147]     110295504 (Col4a4)    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110295504 (Col4a4) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110295504 (Col4a4) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110295504 (Col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110295504 NCBI-ProteinID:  XP_029331248 Ensembl:  MGP_CAROLIEiJ_G0014327 UniProt:  A0A6P7QQ84 LinkDB All DBs Position 1:complement(75638464..75764897) Genome browser AA seq 1648 aa AA seqDB search MRCFFRWTKSFVTAPWSLIFILFTIQYEYGSGKKYGGPCGGRNCSVCQCFPEKGSRGHPG PLGPQGPIGPLGPPGPLGIPGEKGERGDSGSPGPPGEKGDKGPTGVPGFPGVDGIPGHPG PPGPRGKPGVDGYNGSRGDPGYPGERGAPGPGGPPGQPGENGEKGRSVYISGGVKGIQGD RGDPGPPGLPGSRGAQGSPGPMGHAGTPGLAGPIGHPGSPGLKGNPATGLKGQRGDPGEV GQRGPPGPTLFVQPPDLRIYKGEKGVKGMPGMIGPPGPPGRKGEPGVGIKGEKGIPGFPG PRGEPGSHGSPGFPGFKGIQGAAGEPGLLGFLGPKGDPGDRGYPGPPGILLTPAPPLKVG MMGPPGPPGVPGPPGFPGEAGIPGRLDCAPGKPGKPGLPGLPGAPGPEGPPGSDVIYCGP GCPGPMGEKGKVGPPGRRGAKGAKGNEGLCTCPPGPMGPPGPPGPPGRQGSKGDLGLPGW HGEKGDPGQPGAEGPPGPPGRPGAMGPPGHKGEKGDMVISRVKGQKGERGLDGPPGFLGP PGQDGGGGRPGERGDPGPRGDHKDAAPGERGLPGLPGPPGRTGPVGSPGLGFPGPPGQRG LPGEPGRPGMRGFDGSKGQKGDSILCNVSYPGKPGLPGLDGPPGLKGFPGPPGAPGMRCP DGQKGQRGKPGMSEIPGPPGFRGDMGDPGIKGEKGTSPIGPPGPPGSPGKDGQKGIPGDP AFGDPGPPGERGLPGTPGMKGQKGHPGCPGAGGPPGIPGSPGLKGPKGREGSRGLPGILG SPGHSCERGAPGIPGQPGLPGTPGDPGAPGWKGQPGDMGPSGPAGMKGLPGLPGLPGADG LRGPPGIPGPTGEDGLPGLPGLKGLPGLPGFPGFPGERGKSGPDGEPGGKGEVGEKGWPG LKGDLGERGPKGDRGLRGDAGEAVISIKGEPGDAGPPGDGGFSGERGDKGSPGMRGGRGD PGRDGPPGLHRGQPGIDGPPGPPGPPGLPGSPGLRGVIGFPGFPGDQGDPGSPGPPGFPG DDGARGPKGYKGDPASQCGPPGPKGEPGSPGYQGHTGAPGEKGFPGDEGPRGPPGRPGQP GSLGPPGCPGDPGMPGLKGHPGEVGDPGPRGYAGDFGRPGPAGVKGPPGSPGLNGLHGLK GEKGTKGTSGLLEMGPPGPMGMPGQKGEKGDPGSPGISPPGLPGEKGFPGPPGRPGPPGP AGAPGRAAKGDIPDPGPPGDWGPPGPDGPRGVPGPPGSPGNVDLLKGDPGDCGLPGPPGS RGPPGPPGCQGPPGCDGKDGQKGPMGLPGLPGPPGLPGAPGEKGLPGPPGRKGPVGPPGC RGEPGPPADVDSCPRIPGLPGVPGPRGPEGAMGDPGQRGLPGPGCKGEPGPDGRRGQDGI PGSPGPPGRKGDTGEAGCPGAPGPPGPTGDPGPKGFGPGSLSGFLLVLHSQTDQEPACPV GMPRLWTGYSLLYMEGQEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYW LSSAAPLPMMPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSIPPCPRTWRSLWIGYSFL MHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVNPDLQFA SGPSPDTLKEVQAQRRKISRCQVCMKHS NT seq 4947 nt NT seq  +upstreamnt  +downstreamnt atgaggtgctttttcagatggaccaagtcctttgtcacagccccctggtcactaatattt atcctctttactatacaatatgaatatgggagtggcaagaagtatggcggcccctgcgga ggaagaaactgctctgtctgccagtgttttcctgagaagggatctcggggtcacccagga ccactgggaccacagggaccaatagggcccttgggacccccaggacctcttgggattcca ggagaaaaaggagagagaggggacagtggctcacctggaccaccaggagagaaaggagac aagggtccaactggtgtccctggatttccaggtgtggatggtatacctggtcacccaggg cctcccggacccagaggcaaacctggtgtggacggctacaatggctcacgaggtgatccg ggctatccaggagaaagaggagctccaggcccaggtggcccccctggtcagcctggggaa aatggagaaaaaggaagatctgtgtacatttctggtggcgttaaaggtattcagggagac cgtggggacccaggaccacccggcttaccaggatctaggggtgcacaaggatcaccaggg cccatggggcatgcaggcacaccagggctagcaggacctataggtcatcctgggagccct gggttgaagggaaatcctgccactggactgaaggggcaaaggggagatccgggtgaagtt ggccagcgtggtcctcctgggcccacgctgttcgtacagccacctgatttgagaatctat aaaggagaaaagggtgtaaaaggaatgcctggaatgattggccccccaggacctccaggt cgcaagggagagcctggtgtcgggatcaaaggagagaaaggtatccctgggttcccagga ccccggggtgagcctggttcacatggatctccaggttttccaggattcaaggggatacaa ggagcagctggagagcctgggctgctcggatttcttggtccaaagggggatcctggagat cgcgggtacccaggaccaccaggcattttgttgactccagctccaccactcaaagtaggc atgatgggacctcctggaccaccaggggttcctggtcctccaggatttccaggagaagct ggtattcctggaagactcgactgtgccccaggaaaacctgggaagccagggctacccggc ctgcctggcgcaccaggaccagaggggccccctggatcagatgtgatatactgtggccct gggtgccctgggccaatgggtgaaaagggaaaagtgggtcctccaggaagaagaggagcc aaaggagcaaaaggaaacgagggactctgtacctgtccacctggtcccatgggaccccct ggtcccccaggacctcctggaagacaaggaagtaaaggagatttagggctccctggttgg catggagaaaagggtgatccaggtcagcctggtgctgaaggacctccagggccaccagga agacctggtgccatggggccccctggtcacaaaggggaaaagggtgacatggtcatatca agagtgaaagggcaaaaaggagaaagaggactggatgggccaccaggatttttggggcca cctggacaagatggtgggggtggacgtcctggagaaagaggggatcctgggccacgaggg gaccataaggatgcagccccaggtgagagagggcttcctggactgccaggccctccagga agaacaggacctgtggggtctccaggcctgggatttccaggcccaccaggacagcgaggc ctaccaggagagcccgggcgcccgggcatgagaggctttgatggctcgaaggggcaaaaa ggtgactccattctgtgtaatgtaagctacccaggaaaaccaggtctgccaggtcttgat ggacctccaggtctgaaggggtttccaggccccccaggggctcctggtatgagatgtcca gatgggcagaaaggccagcggggcaaaccgggaatgtctgagattccaggtccacctggt tttcgtggtgacatgggagatccaggcatcaaaggtgaaaaggggacctcccctattgga cccccaggcccacctgggtctcctggaaaggatggccagaaaggaatcccaggagaccct gcatttggtgacccaggaccccctggagagaggggtcttccaggaacaccaggcatgaaa ggacagaaaggtcacccagggtgcccaggggctggaggccctcctggcatccctggatct ccaggtctcaaaggtcccaaaggtagagagggaagtcgtggcttaccagggatcctaggc tcccctggccattcctgtgaaagaggtgctccggggatcccaggacaaccgggacttcct ggaactccaggtgatccaggggccccaggttggaaaggccagccaggagacatgggtccc tctggaccagctgggatgaagggcctccctggtctcccaggcctaccaggagctgatggt ctccgagggcctcctgggattccaggccccactggggaagatggtctacctggtcttcca ggcctaaaggggctcccagggctgcctggcttccctggttttccaggagagagaggaaag tcagggccagatggagaacctggaggaaagggagaggttggagagaaaggctggcctggc ttgaagggagacctgggagagcgaggccccaaaggagacagaggacttcgtggtgatgca ggagaagcagtcatttccataaagggtgaacctggggatgctgggcctccaggagatggt gggttctcaggagaaagaggtgataaaggaagcccagggatgcgagggggaagaggtgat cccggaagagatggaccaccgggactccacagagggcagcctgggatagatgggcctcct gggcctcctggcccccctggccttccaggatcacctggactgagaggagtcattggtttt ccaggatttccaggtgaccagggtgatccaggctctccaggaccccctggattcccagga gatgatggagcaagaggacctaaaggatacaaaggcgaccctgccagtcagtgtggtcca cccggtccaaagggtgagccaggtagccctggataccaaggacatactggagcccctgga gagaaaggctttcctggagacgaaggaccccgaggaccaccaggcagacctggacagcct ggctctttgggaccaccagggtgtccaggtgacccagggatgcccggactcaagggacat ccaggagaagtgggagaccctggaccaagaggttatgcgggagattttgggaggccaggt cccgctggagtgaaagggcctcccgggtctcctggtctgaatggcttacacggtctgaag ggtgagaaaggaacaaaaggcacctcaggtttgctcgaaatgggtccacctgggccaatg gggatgcctgggcaaaaaggagagaaaggagaccctgggagtccagggatttctcctcca ggtcttcctggagaaaagggcttcccaggacccccaggaagaccaggaccacctggtccc gcaggtgccccaggaagagctgctaaaggtgacattcctgatccaggtccacctggagac tggggacctcctggccccgatggcccaagaggagtacctgggcctccgggttcccctggg aatgttgaccttctgaaaggggatccaggtgactgtggtttgccaggaccacctggctcc cgaggcccaccaggccctccagggtgtcagggtcccccaggatgtgatggcaaagatggc cagaaaggaccaatgggacttccagggttgccagggccacctggtcttcctggggcacct ggcgagaagggattacctggccctccaggcagaaaagggccagtaggtcctccaggctgc agaggtgaacctgggcctcctgcagacgtggattcctgtcctcgaatcccaggacttcct ggagtgccaggtcccagaggaccagaaggagctatgggggaccctggacagagaggcctg cctggaccagggtgcaaaggagagccaggaccggatggcagaaggggccaggatggcatc cctggatctcccgggcctcctggacgcaaaggtgacactggagaggcagggtgtcctgga gcaccaggccctcctggtccaactggtgatcctgggcccaaggggtttggccctggatcc ctcagtggcttcctcctggttctccacagtcagacagaccaggaaccggcctgccccgtg ggcatgcctcggctttggacagggtacagcttgttgtacatggaaggacaggagaaggca cacaatcaagatcttggtttggcaggctcttgtcttcctgtgtttagcactctgcccttt gcctactgcaacatccaccaagtgtgccactatgcccagagaaatgacaggtcctactgg ctgtccagtgcagctcctcttcctatgatgccactctcagaggaagagatccgcccttac atcagccgctgtgcggtgtgtgaggccccagcacaggccgtggcggtccacagtcaggac caatccatcccaccgtgtccacggacatggaggagcctctggattgggtactcatttctg atgcacactggagctggggaccaaggaggcgggcaggcgctgatgtcacctggcagctgc ctagaggacttcagagctgcaccgttccttgaatgccagggccgacagggaacctgtcac ttttttgcaaacgagtacagcttctggctgaccaccgtgaacccagacctgcagtttgcc tctggcccgtcaccagacaccttgaaagaagttcaggcccagcgccggaaaatcagcagg tgccaggtttgcatgaagcacagctaa

DBGET integrated database retrieval system