Mus caroli (Ryukyu mouse): 110295575
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Entry
110295575 CDS
T05910
Symbol
Tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110295575 (Tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110295575 (Tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcal03016
]
110295575 (Tnpo3)
Transfer RNA biogenesis [BR:
mcal03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
110295575 (Tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
110295575
NCBI-ProteinID:
XP_021019716
Ensembl:
MGP_CAROLIEiJ_G0028176
UniProt:
A0A6P5PU23
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Position
6:complement(24391860..24462541)
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AA seq
923 aa
AA seq
DB search
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVHLPETVHTAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANSSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMSQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccaagccaaccttgcagctcgtgtaccaggcggtgcaggcgctttaccac
gacccggatcccagcggaaaggagcgcgcctcgttttggcttggggagctgcagcgttcg
gttcacgcttgggagatttctgatcaattgttacagatccgacaggatgtggaatcatgc
tatttcgctgcccagaccatgaaaatgaagattcagacctcattttatgagctccccaca
gactctcatgcttctttaagggactcattgctaactcacattcagaacttgaaagacttg
tcgcctgtcattgtaacacagctggctttagcaatagcagacctcgccctacagatgcct
tcttggaaaggatgcgtacaaacattggtagaaaaatatagcaatgatgtaacttcttta
ccttttttgctggaaatccttacagtgttacccgaagaagtacacagtcgttccttgcgg
attggggccaacaggcgcacagaaattatagaagacttagccttctactctagtaccgtg
gtatctttattgatgacatgtgtagaaaaagcaggaaccgatgagaagatgcttatgaag
gtcttccgatgtttgggaagctggtttaacttgggagttttggacagtaacttcatggct
aataataagttattagcactcctttttgaggtcttgcaacaagataagacctcatctaac
ctacatgaagctgcttcagactgtgtatgctcagctctttatgctattgaaaatgtagag
actaatttgccgttggccatgcagctttttcagggagtcctgacattggagactgcctat
catatggctgtggcacgggaagatttggacaaagttctgaattactgccgcattttcacc
gaactatgtgaaactttcctggaaaaaattgtctgtactccaggccaaggtctgggagat
cttcgaactttggaattgcttcttatctgtgcaggccaccctcagtatgaggtagtagaa
atttcctttaacttttggtaccgactaggagaacatttatacaaaaccaatgatgaagtt
attcacagcatcttcaaagcatacattcagaggctgcttcatgccttggctcgacactgc
cagttggaaccagaccatgagggagttcctgaagagaccgatgactttggggagtttcga
atgagagtgtcagacctggtgaaggacttgattttcctgattggatctatggagtgtttt
gctcagttgtattctactctgaaggaaggcaacccaccctgggaggtgacagaagcggtt
ctctttatcatggctgctatagcaaagagtgtggatccggagaacaatcctacacttgtg
gaggtactagagggagttgtccatctcccagagaccgtgcatacagctgtgcggtacact
agcattgagttggtgggtgagatgagcgaagtggtggaccggaatccccagttcctggac
cctgtattgggctatttgatgaaaggcctgtgtgaaaagcctctggcttctgctgcagcc
aaagccattcataacatttgttctgtttgtcgcgatcatatggctcagcactttaatgga
ctcctagaaattgcccactcccttgattctttcatgttgtctcccgaagctgctgtgggt
ttgctaaaaggaacagctcttgtcctagcaagactacctttggataagatcacagaatgt
ctaagtgagttatgttctgttcaggttatggcattgaaaaagctgttgtctcaggagccc
agcaatggcatttcttcagatcccacggtcttcttagatcgcctggcagtaatatttaga
cacaccaatcctattgtagaaaatggacagactcatccatgccaaaaagtcatccaggaa
atatggccagttttgtctgagactctaaataagcaccgagctgacaatcgaattgtagag
cgttgttgtagatgcctgcgctttgcggttcgttgtgtaggcaaaggatctgcagctctg
ctacagccactagttacacagatggtgaatgtgtaccatgtacatcagcattcctgtttc
ctctaccttggcagtatccttgtggatgagtacggcatggaagaaggctgtcggcagggg
ttattagacatgctccaggcgctatgcatccccacctttcagctcctagaacagcagaat
ggcctccaaaatcaccctgacactgtagatgacctattcaggttagccacccgatttatt
cagcgaagccctgtcaccttgctgaggagccaggttgtcatcccaatcttacagtgggcc
attgcatcaaccaccttggaccaccgagatgccaattccagtgtcatgagattcctgcga
gacctcatccacacaggagtagccaatgatcatgaagaagattttgaattgcggaaggaa
ctaattggacaggtgatgagccagcttggccagcaacttgtcagccagctgctccacaca
tgctgcttttgtcttcccccctacaccctacccgacgtggctgaagtgctctgggagatc
atgcaggttgacagaccgactttctgtcggtggctcgagaattccttgaaaggtttgcca
aaagagacaacagtgggagctgtcacagtgacacataaacaacttacagatttccacaag
caagtcactagtgccgaggaatgtaagcaagtttgctgggccttgagagacttcaccagg
ttgtttcgatag
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