Mus caroli (Ryukyu mouse): 110295621
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Entry
110295621 CDS
T05910
Symbol
Herc6
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110295621 (Herc6)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110295621 (Herc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
110295621
NCBI-ProteinID:
XP_021019741
Ensembl:
MGP_CAROLIEiJ_G0028444
UniProt:
A0A6P5PNQ3
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All DBs
Position
6:complement(52517459..52586423)
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AA seq
1017 aa
AA seq
DB search
MYFSWAVGSLKPRRLKAGTGGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQKREQ
STKKPEPIQALNNLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEKSFMPTK
IKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI
PLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVVYI
SCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGRRGPQLIEGIGGCVSQIECASYHTIA
YVYTTGQVVSLGHGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAHANFVT
TRRVSRTRSTGVSMKILPEIIRINQSLVKKWRAANKRKDREDAKREISLIFSSSACLTAS
FLKKRDAGENNFIDVDLKLARDVFKKLTTEKWISSLITTCLEEDLLRDLPYSSPHHDALL
VFLLLPECSIMHDPKNWKTLAFEFAKVIHKMDPQSLAFLRTCWASLEVSSLNILVQMLKK
AIISQIQYGVATEQYITNIKVLLEVIKEVHKAKCQLPESAFIINELSGIFSFDVEAGRMF
IRHNDLVSTEFSDMVVFSDFLFVFDLPSKIKLMKCDSFVKLMSEVMAFPEKMSSPPYLIL
KVRRSHLVEDTLRQLRQVEDFDLRKQLLVEFVNEICPEAGGVSSEFFHCIFEEMTDPKYE
MFIYPEKGSNMWFPVNPKFEKSSYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKPSL
EDLKELSLPLGRNLQEVQNCEADDIEELHMYFSIYWDQKDVDLIPDGISVPVNETNKTDY
VHKCVDYIFNISIKTIYEEFHRGFYKVCNWDIIRQFQPEELMTAIIGNATCDWKQFENNS
KYEDGYDKSHPTILRFWKAFHDLTFDEKKKFLLFLTGCDRLHVKGLQHEGIVFRCSETFS
EEDNLRSLTCHRMLDLPKYSSMRRMKEALQVAINNSTGFVSSPCRNIHLPAVHRLRN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcagctgggctgtaggaagcctgaagcctcggcgcctgaaggcgggaaccggc
ggcattgaactcttacaggcagccagcggggaacaccactcgctcctactgttcagcaac
cacagggtgtattcctgtggggacaacagctggggacagctgggccagaagagagagcag
agtaccaaaaagccagaaccaattcaggcactgaataatctgcatgttgacctggtgagc
tgtgggaaggaacactctgtggctgtctgccacaaaggaaaggtcttcgcttggggagcc
ggttctgaagggcagctggggattggagaatttaaggaaaaaagctttatgcctacgaaa
ataaaagctctggctggcataaaaataatccaagtttcctgtggacactaccactctttg
gcattatcagaagatggccatgtgttttcatggggaaggaacagtgaaggacaactgggc
ctggggaagaattcccgttcccaagctatcccacagaaggtgaagtctctggaggggatc
ccactggctcaggttgctgcaggtggcacacacagttttgctctgtctctcacggggaca
tcatttggctgggggagcaacagatctgggcagctggctctcagcgggaacaaagttaaa
gaacaaatctacaagccacattcaattggtgccctgaagaatctgagtgtggtttatatt
agctgtggttatgagcacactgccgtgcttactgaggagggacaagtgtttacatttgga
ggcaatagctctggacagctacagcccagccccaggagtgggagaagaggcccacaactc
atagaaggaattggtggctgtgtttcacagatagagtgcgcaagttatcacaccattgca
tatgtctacaccaccggtcaggtggtatctttaggccatggaccaagtcacacaagcaac
ccaactcatcaggaggcccccgcggagaactctgacattacctgcctgctagctgcagag
gaccttgtggatattgaagtcaaagacatttttgctggagcacacgccaactttgtgaca
actcgtcgggtatcacgtactaggtctacaggtgtttccatgaaaatcctgccagaaata
atccgaatcaaccagtctctggtaaagaaatggagagcagcaaacaaaagaaaagatcgg
gaagatgccaaaagagaaatcagcttgatattttcatcttctgcttgtttgacagcgagc
tttctgaagaaaagagatgctggagaaaataatttcattgatgtggatttaaaactggca
agagatgtcttcaagaagttaacaacagagaaatggatttcttccttgataaccacatgt
cttgaggaggatctgctcagagatcttccatacagttctccacaccacgacgctctactg
gtttttcttttgctcccagaatgttccattatgcacgatcctaagaactggaagaccctg
gcatttgaatttgcaaaagttattcataaaatggatccacagtcattagcatttctgaga
acatgttgggcatctttggaagtttcttctctgaacatactggttcagatgctaaagaaa
gccatcatctctcaaatacagtatggagttgcaaccgagcagtatattactaatattaaa
gttcttttagaagtgataaaagaagtgcacaaggctaaatgtcaacttccagaaagtgcc
ttcatcataaatgagctttctggcatctttagctttgatgtagaggcaggaagaatgttc
atacggcataatgatctggtctctacagaattctcagatatggttgttttcagtgatttt
ctatttgtctttgatttgccatccaaaattaaactaatgaaatgtgactcatttgtaaaa
ctgatgtctgaagtcatggcatttccagaaaagatgagctccccaccataccttatactg
aaagtcagacgaagtcacctggtggaagatacattgcgtcaattaagacaagtggaagac
ttcgaccttaggaagcaactattggttgaatttgttaatgaaatttgtcctgaggctggg
ggagtgagttcagagttcttccactgtatatttgaagagatgacagaccccaaatatgaa
atgttcatatatcctgaaaagggttccaacatgtggtttccagtcaatcccaagtttgag
aagagcagctatttcctatttgggatcttatgtggactctccctacataacttaaaggtt
atcaaccttccttttccactggctttatataaaaaacttttgaaccaaaagccgtctttg
gaagacttaaaagaacttagtcttcccttggggaggaatttgcaagaagttcaaaattgt
gaggctgatgatattgaagaacttcacatgtatttttctatatactgggatcaaaaagat
gttgatttaattccagatgggatctctgtgcctgtgaacgaaaccaacaagacagactat
gtgcataagtgtgttgattacatttttaacatatctataaagacgatttatgaagaattt
catagaggattttacaaggtgtgtaactgggatataattaggcaattccagcccgaagaa
ctaatgacagcaataattggaaatgctacttgtgactggaaacaatttgaaaataattca
aagtatgaagatggatatgacaaatcacacccaactattctgcggttttggaaggctttc
catgacttaactttcgatgaaaagaaaaaatttctcttgtttcttacaggatgtgatagg
ctgcatgtgaaaggcctacagcatgaagggatagtattccggtgttctgaaaccttcagt
gaagaagataacctaagatcattgacatgtcacaggatgctagacctgcctaagtattcc
tcaatgcgaaggatgaaggaagcacttcaggttgcaatcaacaatagcacgggatttgtc
tcatccccatgcagaaacattcacctcccagcagttcacagactcaggaattag
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