Mus caroli (Ryukyu mouse): 110295677 Help Entry 110295677         CDS       T05910                                  Symbol Alms1 Name (RefSeq) Alstrom syndrome protein 1   KO K16741   alstrom syndrome protein 1 Organism mcal  Mus caroli (Ryukyu mouse) Brite KEGG Orthology (KO) [BR:mcal00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:mcal03036]     110295677 (Alms1)   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:mcal03037]     110295677 (Alms1) Chromosome and associated proteins [BR:mcal03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     110295677 (Alms1) Cilium and associated proteins [BR:mcal03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    110295677 (Alms1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ALMS_repeat Motif Other DBs NCBI-GeneID:  110295677 NCBI-ProteinID:  XP_021019753 Ensembl:  MGP_CAROLIEiJ_G0028582 UniProt:  A0A6P5PT09 LinkDB All DBs Position 6:81734793..81805059 Genome browser AA seq 2904 aa AA seqDB search MEPEDLPWPDELEEEEEEEEEEEGEEEEGKKEVENASAAAPEEALTSEESGRLEEFEEAG PDLDFNCESQRQESTDEEEDELAKAWXQAHPDRPGSAFSLPPPTPPPPPLSPWLRYTPVE HLGKTEVVPLTCRVWQESSYQDNSRAQFSNSSTMLLETGVQWGSEEDQRTESWHCLPQER DSSQTLDVSQTEMGRGEGTEGTDLPSQEGGEPAPSQCPGKKPKLNVLCSPLLVIQDNFAA PDLPLLTCLIQDQEEVEPDSLFQQSELEFAPLRGIPDKSEDTEWLARPSEVSEALIQATS ETSSDLANSCFSISQHPLTGSTTFGSQRSLFMFEQENNGETVPSNAPDELKSPKDSDHDV LCSYMSWLPEKDTQQPEGNLADKDQVSTSTLSDISDESIAAKRNNSFGVSCSCNXYWNQK ALQQTEACLASKDHASFPCKITPLPNKVPYSFLQCMLKRGKGAPLTTDNHLENVCLRTPA EDEMSLKNESLEGFEGNEDLQKELSQFFKQKETRNTWASSQVHTRYPEIKYIGTVAXPDS KKQVAEPYILYRGLDISGCPLRTVKSNLDETSEQLYFQEERNQKAAPTFGEKNVDATENV AFEAIIASIESSNQESLISETQTDNTELLADDSEEKEPLKPDXSLLNCKNEISFIDELKY LKYQSTPGVFEPADSKPLLYKEDDASSLYLYPDLKSPVNAPQNMLSRPVSVTLELKSSLS EKACNQAVGLETRSPSFQYGISNLDLTEKIGSSSISFAMKIATSESWVLEDLKQQTFEEV ADSSDYKLEGLQGKAQSGVLTRCGDAKYSSLYENTGAHSERIAELQREVDCSNLSISQAS PSSLPSFVPQEPTSESEYHSSNLRMLRVSPDTLLTTHTHSAGSAEQKIGAAVVSSASSQE IKPGSFHQQELPDRHLNEEIQKVSPALRTAGQKPEMLPVQSSFYSKGMKSIFCQHPVSHS HQGKEPLNXSAVSGSADNKAFYQQTLSDSLLTQDTLPVSVIPGLGDQKTPVSSEFSLSYS HRGKNLPKDVVKVSTDSGSAHKKADILTASSRTYQYKTKPGFNIYHQELPDSRGPIGTRK VAFESGPAGQKSGVSHPYVEMPSVFYQQGLPDRHSAKSPTKTFIPGPADQKTDLSTVPPT SSSHAEKPVSPCQLTLSGSHLPEDVVKASSVCKSSDELSGITALASASYSSKGRPNISYQ QKYPDSHLTEEAQKILGTTGTDHQNTGAPTVTPSSYFPGEESIIFYQAGFPGNTLSAMSF KVPRISGSTEQTNITTTGSSGSYSVGEKSIIFYHQALPDGHLPKEASPAPADLNTGEPPM YLASCSVGVKPIIFYQQPMSDSQLSKGHKESAVPGPADQKTAIPTVHSTSQSYIGRRTVS YQQAFPDLSEEALKVLGDAGSTEQKTQIPVVSSAPLHKEGPGAYQEDLPDLTEEPLQILG VSEEVSSSSYQRKLPDHTEVFLKSVGSGSADRKTXAQIVSPSREKSSGFHQQELPSTGGD ALDAFHPKPVVQKVXKAQXPGTPAGPSSSHFHKEQPSDYQKTSPGRDLTESSLKASTVPG LHDQKKSPAVSSGFCLHKEKYKISASPLLNCQTAELLTVTQRSCLHGEDPAISTVIKPDD QKIPLPTTFHSSCDQKVKPVIFVQNQLRDRDQSEDIPKISTVSEPTVVNTVLPVLLSGSY SHREKSDSFYPQELPDRHLTEVDLKVSSGLGQADQISGLPTGIPGTYSHSEKHQLISEHV QELMDNLNSSESSCLSVDSMPLNSQIDDGVIICKPESLGFANVGCEEIQDIDHGSKTLKE IQTLLMEAENMALKRCNFSAPLVPFRDVNDVSFXRSKKVVCFKESSTTDVCTQRESFVEV PHIEYVQKDIGTQTNLKYQRGVGNWEFISSATFRSPLQEAEGTARMAYDETFRQYKAARS VMRSEPEGCSTGIGNKMIIPMMTIIKSDSSSDTSITDSREEEWLSESEXGYGSTDSLAAH VKYLLQCETSLNQAKQILKNAEEEEYRVRTQAWNLKFNLGRDRGYSISELNEDDRRKVEE IKAKLFGHGRATHVSEGLRSPRGIRCLPEAVCSRIIIESHEKGCFRTLTAEQPRPDSCHG AFRSVEPSDLLRGHRSPSSWRGRHINLSRSIEQSNPCFKVGNSFQLQSHSPFQKLLPDDI KISKGVGMPVHAYMDPQPSELVEPTCVPAKEMDFPSSSQILPPEPKKQFTTAITFSSHEH SECISDSSGCKVGVTAGSQSSGPSLGVFKPHIPEQQISPRDLKQKTSLQSSLERHGSTPV TILADGSRQRQKLPVDFEHSHQKEKLLQRLDFKVSHSEPNVSTNVSNFKEVQFSGKDTIV SQDKLTSTVEVKEKNVTVTPDLPSCIFLEQQELFEESHTPRTDRHMRKYPSPSCPEIASC IFLEQPKLSEQSKAPHVDHEIREDHSFFPKCQDYIVADPSPDFPDQQQCKPPXVVGHTRR QNSLLSQGQDYELEEVQHIPQSYFSNMVNVKAKVSHAISQSAPDHCTAASTPPSNRKALS CVRITLCPKTSSKLDSGTLGERFHSLDPASKTRINSEFNSDLQIISSRSLEPTSKLLTCK PVAQDQESLVFLGPKSPLDFQVAQSSLPDSKTIFQDLKTKPPQNSQIVTSRQTQVNISNL EGYSKPEGTPVSADGSQEQSKVSFTTSFGKLSSDAITQITTEGPEKTTFSSEIVIHADDR GQGILDPMAQKLSRFASSSLVQQIPASHGKDAQPVLLPYKPSGSSKMYYVPLLKRVPSYL DSKSDTTVESSHSGSNDAIAPDFPPQMLGTRDDDLSNTVNIKHKEGIYSKRAATKGRNPS QKGNAVAPVQMPITWDENVLDENQEEVISRGVVIKMAGPEEMSSLEKDLAGPSDITVQDR KTENLPDTKSIKQKEGSLEIDSTG NT seq 8715 nt NT seq  +upstreamnt  +downstreamnt atggagcctgaggacctgccgtggcctgacgagctggaggaggaggaggaagaagaagag gaggaggagggcgaggaagaggaggggaagaaagaggtggagaacgcctcggcggcggcg cccgaggaggccctgacctctgaggagagtgggagactggaagagttcgaagaggcgggg cccgacttggattttaactgcgagtcccagcggcaggagagcacggacgaagaggaggac gagctggctaaagcctggntgcaggctcaccccgaccgtcctggcagtgctttctctctg ccccctcccacgcctccgcctccgcctctgtccccgtggctccggtacaccccagtggag catctgggcaagactgaggttgtnccactgacttgccgtgtatggcaggagtcatcatat caagataattctagagcccagttttccaactccagtacaatgttattggaaacaggggtc cagtggggctctgaggaggatcagagaacagagtcttggcattgtcttcctcaagaaagg gattcttcccaaaccttggatgtgtcccaaactgagatgggcagaggagaaggaacagaa ggaacagacctaccctctcaggaggggggtgaaccagctccatcacagtgtccaggaaag aagccaaagctcaatgtcttgtgttctccactgctagtgatacaggataactttgctgct cctgatttgcctttgctgacatgtttgatacaagaccaagaagaggttgagcctgattcc ttgtttcaacaaagtgaactcgaatttgcacctttgagaggaattcctgataagtctgaa gatactgaatggcttgctcgaccatcagaagttagtgaagctttaatccaagccacctca gaaacatcttcagacttagctaacagttgctttagtatatctcagcatccacttacaggt agcacaacttttgggtctcagcgctctcttttcatgtttgaacaagagaataatggagaa actgtaccatctaatgcccctgatgaactgaaaagcccgaaggactcagatcatgatgtc ctgtgttcatatatgtcatggctaccagaaaaggacactcagcagccagaaggcaacttg gctgataaagaccaagtttccacctcaactttatccgatattagtgatgaaagtatagct gctaaaagaaacaacagttttggtgtttcttgttcatgtaatcngtattggaaccagaaa gccttacaacagactgaagcatgtctagccagtaaggaccatgcttccttcccatgtaaa attactcctcttcctaataaagtgccatactcttttctgcaatgcatgttaaaaagagga aaaggggctcccttgaccactgataatcatcttgagaatgtttgtttaaggactccagca gaagatgagatgagtctaaagaatgagtctttggagggttttgaaggaaatgaagatctg cagaaagaattatctcaattctttaagcaaaaggagactagaaatacttgggcatcttct caggtgcataccagatatccagagataaagtatattgggactgttgccntccctgatagt aaaaaacaagttgcagaaccatatattctctacagaggacttgatatctctggttgtcct cttcggacagtcaaatccaacttggatgagacatcagaacaactctattttcaagaggaa agaaaccaaaaggcagctcctacttttggtgagaaaaatgttgatgctactgaaaatgta gcctttgaggcaattattgcctcaattgagtcttccaatcaagagagtcttattagtgag actcaaacggataacactgaactgttagcagatgacagcgaagagaaagaacccctaaaa ccagatntttccctgttaaattgtaagaatgaaatctctttcatcgatgagcttaagtat ctgaaataccagtctactcctggggtgtttgaaccagcagattcaaaaccattgttgtat aaagaagatgatgctagctccctatatctgtatccagatttaaagtcacccgttaatgct cctcagaacatgctcagtaggccggtttctgtcactctagagcttaagtcatctttaagt gaaaaagcttgcaatcaggctgttggtcttgaaacacggtcaccttcatttcaatatggt ataagcaatcttgaccttacagagaagataggctcttcaagcattagttttgcaatgaaa atagcaacttcagaatcttgggttttagaagatttaaagcagcagacctttgaagaagtt gcagattcctcagactataaattggagggcctgcaggggaaggctcaatctggcgtcctt actaggtgtggtgatgcgaagtactccagcctttatgaaaacactggtgcacacagtgaa agaattgctgaattgcaaagagaggtagattgctctaatctgagcattagccaggcttct ccatcttcattgccttcatttgttcctcaagaaccaaccagtgagtcggaataccattcc tccaatctcagaatgttgagggtatctcccgacactctgctaacaacgcatacacattca gcaggatctgctgagcagaagattggagcagcagtagtctcttctgcttcctcacaggaa ataaagcctgggagttttcaccaacaagagttgccagataggcatcttaatgaagagatt cagaaagtgtcacctgctcttaggacagctggccagaagcctgagatgctaccagtacaa tctagtttttactctaaaggaatgaaatctattttctgtcaacatcctgtgtcacacagt catcaaggcaaagagcctctaaatgnttcagctgtttctggatcagctgataataaagct ttctaccagcaaacattatcagacagtctactaactcaagacacattgccagtttctgtt attcctggcctaggtgaccagaagactcctgtatcatccgaattctctctttcatattct catagaggaaagaacctgcccaaagatgttgtgaaagtttccactgattctggatctgct cacaagaaggctgacattctaacagcgtcctctagaacctaccagtacaaaacgaaacct ggttttaatatttaccaccaagagttgccagacagtcgtggacctatagggactagaaag gttgcatttgaatctggaccagctggccagaagtctggggtttctcacccatatgttgag atgcccagtgttttctatcagcaggggttgccagataggcattcagcaaaaagccctaca aaaacctttatcccaggaccagctgaccagaagactgatctgtcaacagtaccccccacc tcctcttcgcatgcagagaagcctgtttccccctgccagctaaccttgtcaggtagtcat ctacctgaagatgttgtcaaagcttcttctgtttgtaagtcatctgatgagttatctgga ataacagctctagcctctgcttcctactcatctaaagggagacccaatatttcttatcag cagaaatatccagacagccacctaactgaagaggcccagaaaatcttgggtacaactgga acagaccaccagaacactggggcaccaacagtaactcctagttcctacttccctggagaa gagtccattattttttaccaagctggctttccaggtaacactctgtctgcaatgtctttt aaagttccaaggatttctggatcaactgaacagactaacataacaacaacaggatcatca ggttcctactcagttggagagaagtccattattttctaccatcaggccttgccagatggt catcttcctaaagaagcttctcctgcacccgctgacctaaacactggggagccaccaatg tatttggcttcctgttctgttggagtaaagcccattattttctaccagcagcctatgtca gatagtcagctaagtaaaggtcacaaagaatcagctgttcctggaccagctgaccagaag actgccataccaacagtgcattctacttcccagtcatatatagggaggcgtactgtttct taccagcaagcgtttccagatcttagtgaagaggctttgaaagttctaggtgatgctgga tccactgaacagaaaactcaaataccagtagtgtcttctgctcccttacacaaagagggg cctggtgcntaccaggaggatttgccagatcttactgaagaacctttgcaaattttaggt gtttctgaagaagtttcttctagctcttatcagaggaagttaccagatcatactgaagta tttttgaaatcagtaggctctggctctgctgatcggaagactgnggcacaaattgtctcc ccaagtagagagaagtccagtggttttcatcagcaggagttgccaagtactggtggggat gcactagatgcctttcatcccaaaccagttgtccagaaggtcnggaaggcacagangcct gggacaccagcaggaccttctagttcccacttccataaagaacaacccagtgattatcaa aagacctcaccaggtcgtgatctaactgaaagttctttgaaggcatcaactgttccagga ctacatgatcagaaaaagagccctgcagtctcatctggtttctgcttacacaaagagaaa tacaagatttcagcttcacctttgctgaattgccagacagccgagttgctaacagttact cagaggtcctgtttacatggagaggatcctgccatttcaactgtgatcaaaccagatgac caaaagattccattaccaacaacttttcatagctcctgtgatcaaaaagtaaaacctgtt atttttgttcaaaatcagttacgagatagagatcaaagtgaagatattccgaagatttca actgtctctgagccaactgttgtaaatacagttctaccagtacttctgtctggttcttat tcacacagagagaagtcagattcattttacccacaggaactgccagatagacatctaact gaagttgatctgaaggtttcaagcggtcttggtcaagctgaccagatttctgggttacct acaggtattcctggtacttattcacacagtgaaaagcaccagcttatctcagaacatgtc caagagctgatggataacttgaattcttctgagtcttcttgtctcagtgtggatagtatg cctctaaactcacaaattgatgatggagttatcatatgtaagccagaatctttaggtttt gccaatgttggctgtgaggaaatccaggatatagatcatggttccaaaactcttaaggaa attcagactctcttgatggaagcagaaaatatggcactgaaacgatgcaatttctctgct cccttagtccctttcagagatgttaacgatgtttcatttntacgatcaaagaaggtggtt tgcttcaaagaatcctccacaactgatgtttgtacccagagggagtcatttgtagaagtt ccacacattgaatatgtacagaaggacattggcacacagacgaaccttaagtaccagagg ggtgttggaaattgggaatttatcagttcagctacctttagaagtcctctacaggaagca gaaggcacagctagaatggcatatgatgaaacttttaggcaatataaagctgccaggtct gtaatgaggtctgaacctgaaggctgcagtacaggcattgggaataaaatgattatccct atgatgacaatcataaagagtgactcgagtagtgatacaagcataacagatagccgagaa gaggagtggttgtcagagagcgagganggctatggtagtacagattcattggctgcacat gtgaagtaccttctgcagtgtgaaacttcactgaatcaagccaaacagatacttaaaaat gcagaggaagaggaatatcgggtccgaacccaagcctggaatctaaagtttaatttagga cgtgaccgtggatactccatttcagaattaaatgaagatgacaggaggaaagtagaagag ataaaagcaaagttgtttggtcatggaagagcaactcacgtgtctgagggcttacggagt ccacgaggcataagatgtttgcctgaagctgtatgtagtcgaattattattgagagccat gagaaaggatgtttcaggactcttactgctgaacaaccacggccagacagctgccatggt gcttttcgatctgttgaaccttcagacttgcttagaggacatcggagcccatcatcatgg agaggcaggcacatcaacctttccagatcaatagaacagagcaatccctgtttcaaagta gggaattcctttcagttacagagtcattccccatttcaaaaacttttacccgatgacatc aaaattagcaagggtgttggaatgccagtccatgcatacatggatccccagccatcagaa ttagtagaacctacttgtgtgccagctaaagaaatggattttccttcctcatctcaaata ctgccccctgagcccaagaagcagttcactactgccatcactttttcttctcacgaacac tctgagtgcatttctgattcctctggttgtaaggttggtgttactgcaggtagccagagt agtgggccatctttaggggtatttaagcctcatatccccgaacagcagatttctcctaga gatcttaaacagaaaacctctttgcagtcatcacttgaaaggcatggttctacaccggtg actattttagctgatggtagtaggcaaaggcaaaaattacctgttgattttgagcattct catcaaaaagaaaaactcttacaaagattagattttaaagtcagccattctgaacccaat gtcagtacaaatgttagcaatttcaaggaagttcaattttctggtaaggataccattgtt agccaggacaaactaacttctacagtagaggtaaaagagaagaatgtaactgtaactcct gatcttccttcttgcatttttcttgaacaacaagagctctttgaggaaagccacacccca cgtacagatcgtcatatgagaaaatacccttctccctcttgtccagaaattgcttcttgc atttttcttgaacagccaaaactctctgaacaaagcaaagccccacatgtagatcatgaa ataagagaagatcactctttctttcctaagtgccaggattatatagttgcagacccttct cccgattttcctgatcagcaacaatgcaaacctccanacgtagttggtcacacgagaaga cagaactctcttctttctcaaggtcaggattatgagttagaagaggttcaacatatacct cagtcatacttttctaatatggtaaatgttaaagccaaggtcagtcatgcgatctcccag tcagcccctgaccactgtacagctgcatctactccaccttcaaatagaaaagcactttca tgtgttcgtattactctttgtcccaagacttcttccaagttggatagtggaaccttaggt gaaaggtttcattcattggatcctgcttctaaaacaaggattaatagtgagtttaactct gatctgcaaattatatcttcaaggtcattggaaccaacctccaaattactgacctgtaaa ccagtagcacaggatcaagaatctttagtttttctaggacctaaatctccactggacttc caagtcgcacagtcttctcttccagatagtaagactatttttcaggacttgaaaaccaaa cctcctcagaatagccagatagtaacctcaaggcaaacacaagtgaacatttcaaatttg gaaggatattccaaaccagaggggactccagtatctgcagatggttcacaagaacagagt aaggtttcctttactacgtcctttggaaagttatcatctgatgccatcactcagataaca acagaaggtccagaaaagaccacattttcatctgaaattgttattcatgcggatgatcgt ggacagggcattctagaccccatggcccaaaagctatccaggtttgcctcatcatcctta gtgcagcaaatcccagcttctcatggcaaagacgcccagcctgtgctgttaccatataag ccatctggtagttcgaagatgtattatgttccactgttaaaaagagttccttcatatctg gattccaaatctgataccactgttgagagctcacattcaggctccaatgatgctattgcc ccagactttccacctcaaatgctaggcacaagagatgatgacctctccaacactgtaaac attaagcacaaagaagggatttatagcaagagggctgcaacaaaggggagaaacccctct cagaaaggtaatgcagtggccccagttcaaatgcctataacttgggatgagaatgtcttg gacgaaaaccaagaagaggtcatcagtagaggagttgtgatcaagatggcaggacctgaa gaaatgtcatccctggagaaggaccttgcaggtcccagtgatatcactgtacaagacaga aaaactgaaaatctgccagacactaaatccattaaacagaaggaaggatccttagagata gatagcacaggataa

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