Mus caroli (Ryukyu mouse): 110295774
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Entry
110295774 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04082
Neuroactive ligand signaling
mcal04721
Synaptic vesicle cycle
mcal04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110295774
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110295774
04721 Synaptic vesicle cycle
110295774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110295774
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110295774
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110295774
NCBI-ProteinID:
XP_029334116
UniProt:
A0A6P7RA71
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Position
6:116408241..116427511
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AA seq
564 aa
AA seq
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MSSRAWEERASLSSMDRKVAVHEDGYPVVSWVPEEGEMMDQKGKDQVKDRGQWTNKMEFV
LSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYSSQGSVT
AWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNTEHC
VDFLNHSSARGVSSSENFTSPVMEFWEXVLGLICSAWGRAEAGQDDHWRLPGSPLPLRTR
VRSDFCLLAFQVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYLKPDLLRLKDPQVWMD
AGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMSQ
EQGIPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQTGQQKLFQQP
VGSSFCQHGCCSSVTGRLGCTLPLCGVCYPFYHSWAWGRSGSLPQGQEAFTSGSHLFSHS
AGSGADRFYDNVEDMIGYRPWPLVKISWLXLTPGLCLRLRRLITPDPSLPQPGRRPPQDG
SSAQNCSSSPAKQELIAWEKETHL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaagagcttgggaagaaagggcctccctatccagtatggacaggaaggttgca
gtccatgaagatggctatcctgtggtctcttgggtccctgaggaaggagagatgatggac
cagaaaggcaaggaccaggtgaaggatcgaggccaatggaccaacaagatggagtttgtg
ctgtcagtggctggggagatcattggcttaggcaacgtctggaggtttccctatctctgc
tacaagaatggaggtggagctttcttcatcccctacttcatcttcttcttcagttgtggc
atcccggtgttcttcctggaggtggcactgggccagtatagcagccaggggagtgtgact
gcttggaggaagatctgtcccctcctccaaggcattggcatggcctctgtggtcattgag
tcttatttgaacatctactacattatcatccttgcctgggctctcttctacctgttcagc
tccttcacctgggaacttccctggacaacctgcaccaactcgtggaacacagagcactgc
gtggactttctgaatcactcatcggccagaggagtgagctcttctgagaactttacctca
cctgtcatggaattctgggagtaggttctgggcctgatctgttctgcctggggacgggca
gaggcagggcaggatgaccactggagactccctggctccccgctgcctctgcgtacccgt
gtcagaagtgatttttgcctgcttgccttccaggttgtttacttcacagccacttttccc
tacctgatgctgattattctcctgatccggggtgtnacccttcctggagcctaccagggc
atcgtcttctacctgaagccagacttgctccgcctcaaggacccccaggtgtggatggat
gcgggcacccagatcttcttctcctttgccatctgccaggggtgcctgacagccctgggc
agctacaacaagtaccacaacaactgctacagggactccatcgccctctgcttcctgaac
agcgctaccagcttcgtggctgggtttgttgtcttctccatcctgggcttcatgtctcag
gagcagggaatacccatttcngaagtggctgagtcaggtcctgggctggccttcattgcc
ttccccaaagctgtcaccatgatgcctttgtcccagctgtggtcctgcctcttcttcatc
atgctcctgttcctagggttggacagccagacagggcagcagaagttgtttcagcagcct
gtgggaagtagcttttgccagcacggctgctgctcctctgtgactgggaggctgggctgc
actcttccactgtgtggtgtgtgttaccctttctatcacagctgggcctgggggaggagt
gggagtcttccccaaggccaagaagccttcacttctggctctcaccttttctctcactct
gctggctcaggggctgaccgtttctatgacaacgtggaggacatgattggctatcggcca
tggcccttggtgaagatctcctggctcttnctgactcctggcctttgcctgcgccttcga
agactcatcacaccagaccccagtctgccccagccagggcggcgcccaccacaggatggc
tcctctgctcaaaactgttcatcctctccagccaaacaagaactcattgcctgggagaag
gagactcatttgtag
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