Mus caroli (Ryukyu mouse): 110295828
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Entry
110295828 CDS
T05910
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03015
mRNA surveillance pathway
mcal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110295828
09122 Translation
03013 Nucleocytoplasmic transport
110295828
03015 mRNA surveillance pathway
110295828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110295828
03041 Spliceosome [BR:
mcal03041
]
110295828
03009 Ribosome biogenesis [BR:
mcal03009
]
110295828
03012 Translation factors [BR:
mcal03012
]
110295828
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110295828
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110295828
mRNA cycle factors
Stress granule specific factors
110295828
Spliceosome [BR:
mcal03041
]
Complex C
Other components
EJC/TREX
110295828
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
90S particles
Helicases
110295828
Translation factors [BR:
mcal03012
]
Eukaryotic type
Initiation factors
eIF-4
110295828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
110295828
NCBI-ProteinID:
XP_021019860
UniProt:
A0A6P5PU85
LinkDB
All DBs
Position
6:134323979..134325521
Genome browser
AA seq
229 aa
AA seq
DB search
MLVLDEADEMLKKGFKEQIYDVYRYLPPATQVVLISATLPQEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF
TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI
HRIGRSGRYGRKGVAIDFVKNDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctggttttggatgaggctgatgaaatgttgaagaaaggtttcaaggagcagatctat
gatgtgtacaggtatttgccaccagccacacaggtcgttctcatcagtgccacactgcct
caggagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtgaag
cgtgatgagttgactctggaaggcatcaaacagttctttgtggccgtggaaagagaggaa
tggaagtttgatactctatgtgatctctacgacacgctgaccatcacccaggccgtaatc
ttctgcaacaccaagaggaaggttgactggctgacagagaaaatgagagaagccaatttc
actgtgtcgtccatgcatggagacatgccccagaaagaacgagagtctatcatgaaggag
ttccggtcaggtgccagccgggtgctcatctccacagacgtctgggctcggggcctggat
gtccctcaggtgtccctcatcattaactatgacctgcccaacaacagagaactgtacatt
cacagaattgggagatcgggtcggtatggacgaaaaggtgtggccatcgattttgtgaag
aatgatgacatccggattctcagggacatcgagcagtactatgccacccagatagacgag
atgcccatgaacgtggctgacctcatctga
DBGET
integrated database retrieval system