Mus caroli (Ryukyu mouse): 110295885
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Entry
110295885 CDS
T05910
Symbol
Trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcal01001
]
110295885 (Trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110295885 (Trim24)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110295885 (Trim24)
Protein kinases [BR:
mcal01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
110295885 (Trim24)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110295885 (Trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
110295885
NCBI-ProteinID:
XP_021019914
Ensembl:
MGP_CAROLIEiJ_G0028227
UniProt:
A0A6P5PUC2
LinkDB
All DBs
Position
6:32485786..32591497
Genome browser
AA seq
1053 aa
AA seq
DB search
MEVAVEKAAAAAAPAGGPAAAAPSGENEAESRQGPDSESGGEASRLNLLDTCAVCHQNIQ
SRVPKLLPCLHSFCQRCLPAPQRYLMLTAPALGSAETPPPAPVPAPAPAPGSPAGGPSPF
ATQVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVE
CVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETC
DKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKYTGNQIQNRIIEV
NQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESVAKDHRMKLMQQQQEVAGLSKQLEH
VMHFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNII
NLGSLVIEDKESQPQMPKQNPVVEQSSQPPGGLPSNQLSKFPTQISLAQLRLQHIQQQVM
AQRQQVQRRPAPVGLPNPRMQGPIQQPSISHQHPPPRLINFQNHSPKPNGPVLPPYPQQL
RYSPSQNVPRQTTIKPNPLQMAFLAQQAIKQWQISSGQAPPTTASSSSSTPSSPTITSAA
GYDGKAFSSPMIDLSAPVGGSYNLPSLPDIDCSSTIMLDNIARKDTSVDHAQPRPPSNRT
VQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVML
EPIRIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLLNSSQSSASEETV
LRSDAPDSTGDQPGLHQENSSNGKSEWPDASQKSPVHVGETRKEDDPNEDWCAVCQNGGE
LLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDLSKPEVDYDCDVPSHHADKRKSEGL
TKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYC
MYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRH
EAEDCKFSDDSDDDFVQPRKKRLKSTEDRQLLK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaggcggcggcggcagcggctccggccggaggccccgcagcg
gcggcgccgagcggggagaatgaggccgagagccggcagggcccggactcggagagcggc
ggcgaggcgtcccggctcaacctgttggacacttgcgccgtgtgccaccagaacatccag
agccgggtgcccaagctgctgccctgcctgcactcgttctgccagcgctgtttgcccgcg
ccgcagcgctatctcatgctgacggcgcccgcgctgggctcggcagagacccctccaccc
gctccggtccccgcccccgcccccgccccgggctccccggccggtggtccttcgccattc
gccacccaagttggagtcattcgatgcccagtttgcagccaagagtgtgctgagagacac
atcatagacaacttttttgtgaaggacaccactgaagttcctagtagtacagtagaaaag
tcgaatcaggtatgtacaagctgtgaagacaatgcagaagctaatgggttttgtgtagag
tgtgttgaatggctctgcaagacatgtattagagctcaccagagggtgaagttcacaaaa
gaccacacagtcaggcagaaagaagaagtatctccagaggcagttggtgtgaccagtcag
cgaccagtgttttgtcccttccataaaaaggagcagttgaaactttactgtgaaacatgt
gataaactgacctgtcgagactgccagctgctagaacacaaagagcacaggtatcaattt
atagaagaagcttttcagaatcaaaaagtgatcatagatactctaatcaccaaactgatg
gaaaaaacaaaatatataaagtatacaggaaatcagatccaaaataggataattgaagta
aatcaaaaccaaaagcaggtggaacaggatattaaagttgccatcttcacattgatggtg
gagataaacaagaaagggaaagctctgctgcaccagcttgagagtgttgcaaaggaccat
cgaatgaaacttatgcaacaacaacaggaagtggctgggctttctaagcagttagagcac
gtcatgcatttttctaaatgggctgtttccagtggcagcagcacagccttgctgtacagc
aagcggctgattacatacaggttgcggcaccttcttcgggcaaggtgtgatgcttctcct
gtgaccaacaacaccatccagtttcactgtgatcctagtttctgggctcaaaatattatc
aacttgggttctttagtaatcgaggataaagagagccagccacaaatgcctaagcagaat
cctgtcgtggaacagagttcacagccaccaggtggtttaccttccaaccagttatccaag
ttcccaacacagatcagcctagctcagttacgactccagcatatacagcaacaggtaatg
gctcagaggcaacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatg
caggggcccatccagcagccttccatctctcatcagcatccgccaccacgcttaataaac
tttcagaatcacagccctaagcccaatggaccagttcttcctccttatcctcagcagctg
agatattcaccaagccagaatgtacctcggcagacaacaataaaacccaaccccttgcaa
atggcttttttggctcaacaggccataaaacagtggcagatcagcagtggacaggctccg
cccacaactgccagcagctcctcctccactccgtccagtcccacaatcacaagtgcagct
gggtatgatggaaaagcttttagttcacccatgattgatctgagtgcaccagtgggaggg
tcttacaatcttccttctcttccagatattgattgttcaagtactataatgctggacaac
attgcaaggaaagacacaagtgtagatcacgcccagccgaggcctccatcaaacagaacg
gtgcagtcaccaaattcatcagtgccatctccaggccttgcagggcctgttactatgact
agcgtccatcccccaatacgttcacctagtgcctccagtgttggaagtcgaggaagctct
ggctcttccagcaaaccagcaggagctgattctactcacaaggtcccagtagtcatgctg
gagccaattcgaataaaacaggaaaacagtggaccacctgaaaattatgattttcctgtt
gttatagtaaaacaagaatcagatgaagaatctagacctcaaaatactaactatccaaga
agcatacttacctccctcctcttaaacagcagtcagagctctgcttctgaggaaaccgtg
ttacgatctgatgcccctgatagtacaggagatcagcctggactccatcaagaaaattcc
tcaaatggaaagtctgagtggccggatgcctcccagaagtcccctgtgcacgtcggagag
acaaggaaggaggatgaccccaatgaagactggtgtgctgtttgtcaaaatggtggggag
ctcctgtgctgtgagaagtgccctaaagtattccatcttacttgtcatgtgcccacactg
acaaattttccaagtggagaatggatctgtactttctgccgagacttatctaagccagag
gttgactatgattgtgatgttcccagtcaccacgcagataaacggaaaagtgaaggcctt
actaagctaacgccaatagacaaacggaaatgtgaacgcctacttctgtttctttactgc
catgaaatgagcctggctttccaagaccctgttcctctaactgtgcctgattattataaa
ataattaaaaacccaatggacttgtcaaccatcaagaaaagacttcaggaggattattgc
atgtatacaaagcctgaagactttgtagctgattttagattgatctttcaaaactgtgct
gaattcaatgagcctgattctgaagtagccaatgctggtataaaacttgaaagctatttt
gaagaacttctaaagaatctttatccagaaaaaaggtttcctaaagtagaattcaggcat
gaagcagaagactgtaagttcagtgacgactcagacgatgactttgtacagccccggaag
aagcgcctcaagagcacagaggaccgccagctgcttaagtaa
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