Mus caroli (Ryukyu mouse): 110295893
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Entry
110295893 CDS
T05910
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110295893 (Vps50)
Membrane trafficking [BR:
mcal04131
]
Protein recycling
Others
EARP complex
110295893 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
110295893
NCBI-ProteinID:
XP_021019926
Ensembl:
MGP_CAROLIEiJ_G0028069
UniProt:
A0A6P5PVZ9
LinkDB
All DBs
Position
6:62196..163263
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLNDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQSAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDIRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEETAAAAEG
SNVMSTEEATFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQQSATSSKPVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLKTTLNRIQESLIDLEGSADPTATLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMMNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDEID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccggcagggtctgaagagccctccggagagcctc
aatgatcttggtgcctttgagagccttcgggtccctggaaaggaggaattcagggagctt
cgagaacaaccaagcgaccctcaagctgaacaagagttaattaatagtattgaacaagtc
tatttttctgcggatccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatctgcaagaattagaggagtacagagacaaattaaagcaacaacaatctgcagtc
tctaaaaaagtggcagatttgattcttgaaaagcagcctgcttatgtaaaggagcttgaa
agagtcacatcactgcagacaggtcttcagttggctgctgtcatctgcacaaatgggagg
aggcacttgaatattgcaaaggaaggttttactcaggctagcttaggccttcttgcaaat
caaaggaagcgtcagttgctaattggacttctgaagtcgctgagaaccataaagacattg
caaagaactgacatacgcttaagtgaaatgctggaggaagaggactatccaggagctatt
cagctgtgcctagaatgtcagaaggctgccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaagatactttggagcaaatcgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcagcaagcttac
cggcttcttggaaaaacacagactgcaatggatcagcttcatatgcacttcactcaagcc
attcacaacaccgtatttcaggttgtgcttggctatgtggagctgtgtgcaggaaacacg
gatacaaaattccagaagcttcagtataaagatctctgtacgcacgtgacaccagacagc
tatattccgtgcctggcagacctgtgcaaagcactgtgggaagtcatgctcagctactac
agaaccatggagtggcacgagaaacacgacaatgaggaaacagctgcagctgctgaagga
agcaatgtgatgagtactgaggaggccacttttgaccgtggctacgtaaagaagaagtta
gagcacggccttacccggatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttatctatattcaaatatgatgatttcatctttgttctggatattgtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagtgttgcaggagtcc
attagaaaacaaagtgtcaattacttcaagaaccaccataggatacgacttgatgaactg
agaatgttcttagagaatgagacatgggagctttgccctgttaaatcaaatttcagcatc
ttgcagcttcatgagtttaaattcctggaacagtctcgctccccgtcagtttcacctagt
aagcagcagtcggcaacttcttcaaagcctgtgactttgtttgagcagtactgcagtggt
gggaatccatttgaaatacaagctgaccacaaagatgaagaaactgaagatgtcttagcc
tctaatgggtatgaatctgacgagcaggagaagagtgcctaccaggactatgacagtgac
agcgacgttcctgaggaactgaagcgggattacgtggacgagcagaccggcgacgtgccc
gtgaagagtgtttcacgagagacccttaagagcaggaagaagtcggattacagtctaaat
aaagtgaatgcacccatcttaaccaacacaacactgaatgtaataaggcttgttggaaag
tacatgcagatgatgaacatccttaagccaatcgccttcgatgtgatccatttcatgtct
cagctctttgactattacttgtatgccatatataccttttttggtaggaatgattcattg
gaatcaacaggacttggccttagtagtagcagactaaaaacaactctaaacagaattcaa
gaaagccttattgacctggagggctcagctgatccaactgccactctcacagcagccgag
gaaagaaaggagaaggtacccagcccacacctcaatcagctagtgattttgacatctggg
gatacattgtatgggttggcagagagagtggtagccacagaatccttagtgttcttggct
gagcagtttgagttccttcagccacatttggatgctgtgatgcctgcagtcaaaaagccc
ttcctgcagcagttttactcccagacagtctcaactgccagtgaactgcgcaaacccatt
tactggattgtggctggtaaagctattgattatgaacagatgcttctcctcatgatgaat
gtgaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattgctg
aaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggatacct
ttgcctgtatcaaatatactgtgggagcattgtatacgattagctaacagaactattgtg
gaaggatacgccaatgtcaagaagtgcagtaatgaggggcgtgccttgatgcaattggat
ttccaacagtttttaatgaaacttgaaaaactaactgacattagacctattcctgataaa
gaatttgtggaaacatatatcaaagcctactacctaactgagaatgacatggagcgttgg
atcaaagagcacagggaatattcaacgaagcagttgaccaacctggtgaatgtttgccta
ggatctcatatcaataagaaagcaagacagaagctcctagcagctatagatgagatagac
aggcctaaaagataa
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