Mus caroli (Ryukyu mouse): 110295901
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Entry
110295901 CDS
T05910
Symbol
Pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03320
PPAR signaling pathway
mcal04148
Efferocytosis
mcal04152
AMPK signaling pathway
mcal04211
Longevity regulating pathway
mcal04380
Osteoclast differentiation
mcal04714
Thermogenesis
mcal04932
Non-alcoholic fatty liver disease
mcal05016
Huntington disease
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05216
Thyroid cancer
mcal05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
110295901 (Pparg)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110295901 (Pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110295901 (Pparg)
09158 Development and regeneration
04380 Osteoclast differentiation
110295901 (Pparg)
09149 Aging
04211 Longevity regulating pathway
110295901 (Pparg)
09159 Environmental adaptation
04714 Thermogenesis
110295901 (Pparg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110295901 (Pparg)
05202 Transcriptional misregulation in cancer
110295901 (Pparg)
09162 Cancer: specific types
05216 Thyroid cancer
110295901 (Pparg)
09164 Neurodegenerative disease
05016 Huntington disease
110295901 (Pparg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110295901 (Pparg)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
110295901 (Pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110295901 (Pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcal03310
]
110295901 (Pparg)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110295901 (Pparg)
Nuclear receptors [BR:
mcal03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
110295901 (Pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
110295901
NCBI-ProteinID:
XP_021019938
Ensembl:
MGP_CAROLIEiJ_G0028751
UniProt:
A0A6P5PW09
LinkDB
All DBs
Position
6:110463234..110593173
Genome browser
AA seq
537 aa
AA seq
DB search
MTISLFPLTNQSFARHRQNTSVNYSKSLFYAVMGETLGDSPVDPEQGAFADALPMSTSQE
ITMVDTEMPFWPTNFGISSVDLSMMEDHSHSFDIKPFTTVDFSSISAPHYEDIPFTRADP
MVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNRPHEEPSNSLMAIECRVCGDKASG
FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
KNIPGFINLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
LKLNHPESSQLFAKVLQKMTDLRQIVTEHVQLLHVIKKTETDMSLHPLLQEIYKDLY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaccataagcctttttcctttaaccaaccaatcttttgcaagacatagacaaaacacc
agtgtgaattacagcaaatctctgttttatgctgttatgggtgaaactctgggagattct
cctgttgacccagagcaaggtgccttcgctgatgcactgcctatgagcacttcacaagaa
attaccatggttgacacagagatgccattctggcccaccaatttcggaatcagctctgtg
gacctctccatgatggaagaccactcgcattcctttgacatcaagccctttaccacagtt
gatttctccagcatttctgctccacactatgaagacattccattcacaagagctgaccca
atggttgctgattacaaatatgacctgaagctccaagaataccaaagtgcgatcaaagta
gaacctgcatctccgccttattattctgaaaagacccagctctacaacaggcctcatgaa
gagccttctaactccctcatggccattgagtgccgcgtctgtggggataaagcatcaggc
ttccactatggagttcatgcttgtgaaggatgcaagggttttttccgaagaaccatccga
ttgaagcttatttatgataggtgtgatcttaactgccggatccacaaaaaaagtagaaat
aaatgtcagtactgtcggtttcagaagtgccttgctgtggggatgtctcacaatgccatc
aggtttgggcggatgccacaggccgagaaggagaagctgttggcggagatctccagtgat
atcgaccagctgaacccagagtctgctgatctgcgagccctggcaaagcatttgtatgac
tcatacataaagtccttcccgctgaccaaagccaaggcgagggcgatcttgacaggaaag
acaacggacaaatcaccatttgtcatctacgacatgaattccttaatgatgggagaagat
aaaatcaagttcaaacatatcacccccctgcaagagcagagcaaagaggtggccatccga
atttttcaagggtgccagtttcgatccgtagaagccgtgcaagagataacagagtatgcc
aaaaatatccccggtttcattaaccttgacttgaatgaccaagtgactctgctcaagtat
ggtgtccatgagatcatctacacgatgctggcctccctgatgaataaagatggagtcctc
atctcagagggccaaggattcatgaccagggagttcctcaaaagcctgcggaagcccttt
ggtgactttatggagcctaagtttgagtttgctgtgaagttcaatgcactggaattagat
gacagtgacttggctatatttatagctgtcattattctcagtggagaccgcccaggcttg
ctgaatgtgaagcccatcgaggacatccaagacaacctgctgcaggccctggaactgcag
ctcaagctgaaccacccagagtcctctcagctgttcgccaaggtgctccagaagatgaca
gacctcaggcagatcgtcacagagcacgtgcagctactgcatgtgatcaagaagacagag
acagacatgagccttcaccccctgctccaggagatctacaaggacttgtattag
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