KEGG   Mus caroli (Ryukyu mouse): 110296015
Entry
110296015         CDS       T05910                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04145  Phagosome
mcal04210  Apoptosis
mcal04530  Tight junction
mcal04540  Gap junction
mcal04814  Motor proteins
mcal05010  Alzheimer disease
mcal05012  Parkinson disease
mcal05014  Amyotrophic lateral sclerosis
mcal05016  Huntington disease
mcal05020  Prion disease
mcal05022  Pathways of neurodegeneration - multiple diseases
mcal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110296015
  09143 Cell growth and death
   04210 Apoptosis
    110296015
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110296015
   04540 Gap junction
    110296015
  09142 Cell motility
   04814 Motor proteins
    110296015
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110296015
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110296015
   05012 Parkinson disease
    110296015
   05014 Amyotrophic lateral sclerosis
    110296015
   05016 Huntington disease
    110296015
   05020 Prion disease
    110296015
   05022 Pathways of neurodegeneration - multiple diseases
    110296015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110296015
   03036 Chromosome and associated proteins [BR:mcal03036]
    110296015
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcal04812]
    110296015
   04147 Exosome [BR:mcal04147]
    110296015
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110296015
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110296015
Cytoskeleton proteins [BR:mcal04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110296015
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110296015
  Exosomal proteins of other body fluids (saliva and urine)
   110296015
  Exosomal proteins of colorectal cancer cells
   110296015
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110296015
NCBI-ProteinID: XP_021020153
Ensembl: MGP_CAROLIEiJ_G0029049
UniProt: A0A6P5Q0V3
LinkDB
Position
6:143417175..143422833
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccacgtggggcaggcaggtgtccagatcggcaatgcctgc
tgggaactgtactgccttgaacatggcattcaacctgacggacaaatgccaagcgacaaa
accattggcggcggggacgactcattcaacacattcttcagtgagactggagcnggcaag
catgtgcccagggcagtgtttgtggacctggagcccactgtggtcgatgaagtacgcacc
ggaacctaccggcagcttttccacccagagcagctgatcactgggaaggaagatgcagcc
aacaattatgccagaggtcattacaccattggcaaggagattgttgacctggtcctggat
cggatccgaaaactggcagatctgtgcacaggactgcagggcttcctcatcttccacagc
tttggaggtggcacagggtctgggtttgcatcgctgctgatggagcggctttcagtggac
tatggcaagaaatccaagctggagtttgccatttacccagccccccaggtttctacagca
gtcgtggagccttacaactccatcctgaccacacacaccaccctggaacattccgactgt
gctttcatggtggataacgaagccatctatgacatctgccggcgcaacctggatattgaa
cgtcccacatacaccaacctcaatcgtctgattgggcagattgtgtcatccatcacagcc
tccctgaggttcgatggcgccctgaatgtggacttaacagaattccagaccaacctggtg
ccataccctcgcatccacttcccactggcgacctatgccccagtcatctctgctgagaag
gcataccatgagcagctgtcagtggcagagatcaccaacgcttgcttcgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttcccaaagatgtcaatgcagctattgccaccatcaagaccaagcgcacc
atccagtttgtagattggtgccctactggatttaaggtgggtattaactaccagcctcct
accgtggtccctgggggagacctggccaaggtgcagcgggccgtgtgcatgctgagcaat
accacggccatcgcagaggcctgggcccgcctggaccacaaatttgacctcatgtacgcc
aagcgggcctttgtgcattggtacgtgggagaaggcatggaggaaggggagttctccgag
gcccgggaggacctggcagcactggagaaggattatgaagaggtgggcgtggattccgtg
gaagcagaggcagaagaaggggaggagtactga

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