Mus caroli (Ryukyu mouse): 110296216
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Entry
110296216 CDS
T05910
Symbol
Cntn3
Name
(RefSeq) contactin-3 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110296216 (Cntn3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcal00537
]
110296216 (Cntn3)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
Contactins
110296216 (Cntn3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcal00537
]
Others
110296216 (Cntn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Tissue_fac
C2-set_3
fn3_2
NAGLU_N
Motif
Other DBs
NCBI-GeneID:
110296216
NCBI-ProteinID:
XP_021020464
Ensembl:
MGP_CAROLIEiJ_G0028693
UniProt:
A0A6P5PUL6
LinkDB
All DBs
Position
6:complement(97985575..98340391)
Genome browser
AA seq
1028 aa
AA seq
DB search
MMLSWKQLILLSFIGCLAGELLLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHY
RWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAY
LENFKTRMRSTVSVREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGH
LYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA
KGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYECIAE
NSRGKNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVL
EERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQ
VQVGSLVILDCKPRASPRALSFWKKGDMMVREQARISFLNDGGLKITNVTKADAGTYTCT
AENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGV
LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGP
PENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTVPEVIDGKTHTA
TVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVIT
WDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNESIVPFSPYEVKVGV
YNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEV
RYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKK
TPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSA
ELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNIHPLSGYISVLL
FFIVNALW
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtcatggaaacagttgatcctgctttcattcattggctgcctggcaggtgag
cttcttttacaaggccccgtgtttatcaaagagcccagcaacagtattttccctgttgat
tcggaggacaaaaaaataacattaaattgtgaagcaagaggcaacccttcacctcattac
aggtggcagctgaatggcagtgatattgatacaagtctggaccatcgttacaaactgaat
ggaggaaatctcatagttattaaccctaacagaaattgggatacaggaagttaccagtgt
tttgcaacgaattctcttggaaccatagtgagcagagaagccaaactccagtttgcctat
cttgaaaattttaagaccaggatgagaagcactgtgtcagtccgtgaaggccagggagtg
gtgcttctctgtggacccccacctcactcaggtgaactgtcatatgcttgggtcttcaat
gagtatccatcatttgttgaagaggacagtcgacgatttgtctctcaagagacaggacac
ctctacatagctaaggtggaaccatctgatgtgggaaattacacatgtgtggtgaccagc
actgtgacaaataccagagtattgggctccccaacccctttggtgctacgctctgatggt
gtcatgggtgaatatgaacccaaaatagaagtccagtttccagagactcttccagcagct
aaaggttcaactgtgaggttggaatgcttcgccctgggaaaccctgttcctcagattaat
tggagaagaagtgatgggatgccgtttcccaacaaaattaagttgaggaagttcaatggt
atgctcgaaattcaaaacttccaacaggaagatacaggctcctatgagtgtattgctgaa
aattcaagaggaaaaaatgtggcgagagggcggctcacttactatgcaaaaccttattgg
cttcaactcttaagagatgtggaaattgctgtggaggacagtctttactgggaatgccgg
gcaagtgggaagcctaaaccctcttatcgatggctgaaaaatggagatgccttagtatta
gaggagagaatacagatagaaaatggtgcccttacaataaccaacctcaatgtgactgac
tctggaatgttccaatgtatagcagaaaacaagcatggtctcatctactccagtgctgag
ctcaaggtagtagcttccgctccagatttttcaagaaaccctatgaaaaaaatggttcag
gtgcaggtgggcagcctggtgatcttggattgtaaacccagagcctctccaagggcactt
tctttctggaagaagggagacatgatggtgcgggagcaggcgaggatttcttttttaaat
gatggaggactcaaaatcacaaatgtgactaaggcagatgctggaacctacacctgcaca
gcagaaaaccagtttgggaaagcaaatggcacaacccatttggttgtgacagaaccaacg
agaataattttggcaccttccaacatggacgttgccgttggtgagagcatcattttaccc
tgccaggttcaacatgatcccctattagacataatgtttgcctggtacttcaatggcgtc
cttacagactttaagaaagatggatctcactttgagaaagttggtgggagttcatctggt
gatttaatgatcagaaacattcaactgaaacacagtgggaagtacgtatgtatggtgcag
acaggggtggacagcgtttcctctgcagctgagctcatcgtgagaggttcacctgggcca
ccggaaaatgtgaaggtagatgaaattacagacacaacagcccagctctcttggacggaa
ggcaccgacagtcatagcccagttatatcgtatgcagtccaagctaggacgcctttctct
gtgggctggcaaagtgtcagaacagtacctgaggtcattgatggcaagacacatacagct
actgtcgtggagttaaacccatgggtggaatatgaatttcgcattgtagccagtaacaaa
atcggaggtggagaacccagtttaccctcagaaaaagtaaggactgaagaggcagctcca
gaaatcgcaccttctgaggtcagcggaggaggtggaagccgatctgaactagtgataacc
tgggatccagtccctgaagaactacagaatggaggaggttttgggtatgtggttgctttc
cgcccacttggggttaccacctggatccagacagtggtgacatccccagataacccaaga
tacgtctttaggaatgaaagcattgtgcccttttcgccatatgaagttaaagtgggagtt
tacaataacaaaggtgaaggaccctttagcccagtgacaactgtgttctctgcagaggaa
gagcctacagttgccccatctcacatctctgctcatagcctgtcttcttcagaaattgaa
gtttcttggaacacaattccctggaagttgagcaatggacatttacttggctatgaggtg
cggtactggaacaatggaggagaagaagaatcatcccgcaaagtgaaagtggcaggaaat
cagacatcagctgtgctccgaggcctgaagagcaacctggcctattacacagctgtccgg
gcttacaacagcgcaggtgctggtcccttcagcgccacagttaatgcgaccaccaagaaa
acccctcccagtcagccaccaggaaatgttgtttggaatgctacagacactaaagtgtta
cttaattgggaacaagtgaaagccatggagaatgaatcagaagtaacaggctacaaggtt
ttctataggactagcagtcagaataatgtgcaggtgctgaacacaaataaaacttcagct
gaactgttgctgcctatcaaagaagactacattattgaggtcaaggccaccacagatgga
ggggatggcaccagtagtgagcagatcaggattccaagaataaccagtatggatgcaaga
ggatccacgtcagccatttctaacattcaccctttgtcaggttatatatctgtcctactg
ttctttattgtaaatgctttgtggtga
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