Mus caroli (Ryukyu mouse): 110296234
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Entry
110296234 CDS
T05910
Symbol
Slc6a1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04082
Neuroactive ligand signaling
mcal04721
Synaptic vesicle cycle
mcal04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110296234 (Slc6a1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110296234 (Slc6a1)
04721 Synaptic vesicle cycle
110296234 (Slc6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110296234 (Slc6a1)
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110296234 (Slc6a1)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110296234
NCBI-ProteinID:
XP_021020487
Ensembl:
MGP_CAROLIEiJ_G0028743
UniProt:
A0A6P5PVN1
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Position
6:109393639..109428100
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AA seq
599 aa
AA seq
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MATDNSKVADGQISTEVSEAPVASDKPKTLVVKVQKKAGDLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSLV
NTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVV
YFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPSEDIVRPENGPEQPQAGSSASKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgacaacagcaaggtggctgatgggcagatctctaccgaggtcagcgaggcc
cctgtggccagcgacaagcccaaaaccctggtagtcaaggtgcagaagaaggccggggac
ctccctgaccgggacacatggaagggacgcttcgacttcctcatgtcctgtgtgggctac
gccattggcctgggcaatgtgtggaggttcccttacctctgcgggaaaaacggtggcggg
gccttcctaatcccatatttcctgacgctcatctttgcgggtgttcctctcttccttttg
gagtgctccctaggccagtacacctccattgggggcctgggtgtttggaagctggcaccc
atgttcaagggtgtgggcctcgcggcagctgtgctgtccttctggctgaacatctactac
atcgtcatcatctcctgggccatctactacctgtacaactccttcaccacgactctgcca
tggaaacagtgtgacaacccgtggaacactgaccgctgcttctccaactacagcctggtc
aataccaccaacatgaccagcgccgtggtggagttctgggagcgcaacatgcaccagatg
acagatgggctggacaagccaggacagatccgctggccgctggccatcacactggccatt
gcctgggtgctcgtgtatttctgcatctggaagggtgttggttggactggaaaggtggtc
tacttctcagccacgtacccctacatcatgcttatcatcctgttcttccgtggagtgacg
cttcccggggccaaggaggggatcctcttctacatcacacccaacttccgaaagctgtct
gattctgaggtgtggcttgatgccgccacccagatcttcttctcctacgggctgggcctg
gggtccctgattgctctgggaagctacaactctttccacaacaatgtgtacagggactcc
atcatcgtttgctgcatcaactcctgcaccagcatgtttgccggcttcgtcatcttctcc
atcgtcggcttcatggctcatgtcaccaagaggtccatagctgatgtggcagcctcaggc
ccggggctggcattcttggcataccctgaggctgtgacacagctacccatctctcccctc
tgggctatcctgttcttctccatgctgctgatgctgggcattgacagccagttctgtacc
gtggagggcttcatcactgccctggtggacgagtaccccagacttctccgcaatcgccgt
gaactcttcattgctgccgtgtgcattgtgtcctacctgattggcctgtctaacatcacc
cagggtggcatttatgtcttcaaactgtttgattattactctgccagcggcatgagcttg
ctgttcctggttttcttcgagtgtgtctccatttcctggttttatggtgtcaaccggttc
tatgacaacatccaggagatggttggctccaggccctgcatctggtggaagctgtgctgg
tcctttttcacacccatcattgtggcgggcgtgtttctcttcagtgctgtgcagatgaca
ccactcaccatgggaagctacgttttccccaagtggggccagggtgtgggctggctcatg
gctctgtcctccatggtgctcatccccgggtacatggcttacatgttccttaccctgaag
ggctctctgaagcagcgtctccaggtcatgattcagcccagtgaagatattgtgcgccct
gagaatggccctgagcagccgcaggctggcagctcagccagcaaggaggcctacatctag
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