Mus caroli (Ryukyu mouse): 110296321
Help
Entry
110296321 CDS
T05910
Symbol
Hoxa1
Name
(RefSeq) homeobox protein Hox-A1 isoform X1
KO
K09301
homeobox protein HoxA/B/D1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110296321 (Hoxa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110296321 (Hoxa1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110296321 (Hoxa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Glu_cys_ligase
PHC2_SAM_assoc
Motif
Other DBs
NCBI-GeneID:
110296321
NCBI-ProteinID:
XP_021020634
Ensembl:
MGP_CAROLIEiJ_G0028381
UniProt:
A0A6P5PQL7
LinkDB
All DBs
Position
6:complement(46638942..46641882)
Genome browser
AA seq
336 aa
AA seq
DB search
MDNARMNSFLEYPILGSGDSGTCSARAYPSDHGITTFQSCAVSANSCGGDDRFLVGRGVQ
ISSPHHHHHHHHHHHPQTATYQTSGNLGVSYSHSSCGPNYGAQNFSAPYGPYGLNQEADV
SGGYPPCAPAVYSGNLSTPMVQHHHHHQGYAGGTVGSPQYIHHSYGQEQQTLALATYNNS
LSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTK
QLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPAT
PPGSDEKTEESSEKSSPSPSAPSPASSTSDTLTTSH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcaagaatgaactcctttctggaataccccatccttggcagtggcgactct
gggacctgctccgcgcgagcttacccctctgaccatgggattacaactttccaatcctgc
gcggtcagtgccaacagctgcggcggcgacgaccgcttcctagtgggcaggggggtgcag
atcagctcgccccaccaccaccaccaccaccaccaccatcaccacccccagacggctact
taccagacttctggaaaccttggggtttcttattcccactcgagttgtggtccaaactat
ggcgcgcagaacttcagtgcgccttatggcccctatggattaaatcaggaagcagacgta
agtggtgggtaccccccgtgcgctcccgctgtttactctggaaacctctcgactcccatg
gtccagcatcaccaccaccaccagggttatgctgggggcacagtgggctcgccccagtac
attcaccactcatatggacaagagcagcagactctggccctggccacgtataataactcc
ttatcccctctccacgccagccaccaagaagcctgtcgttcccctgcttcagagacgtct
tctccagcgcagacctttgactggatgaaagttaaaagaaaccctcccaaaacagggaaa
gttggagagtacggctacgtgggtcaacccaacgcagtgcgcaccaatttcaccaccaag
cagctcacagagctggagaaggagttccacttcaacaagtacctcacacgagcgcgcagg
gtggagattgcggcttccctacagctcaatgagacccaggtgaagatctggttccagaat
cgccgcatgaagcagaagaagcgtgagaaggaggggctcctgcccatctcccccgccact
cctcctggaagcgatgagaaaacggaagaatcatctgagaaatctagcccctcgcccagt
gccccttctccggcatcgtctacctcagacactctgactacctcccactga
DBGET
integrated database retrieval system
