Mus caroli (Ryukyu mouse): 110296366
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Entry
110296366 CDS
T05910
Symbol
Rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00510
N-Glycan biosynthesis
mcal00513
Various types of N-glycan biosynthesis
mcal01100
Metabolic pathways
mcal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
110296366 (Rpn1)
00513 Various types of N-glycan biosynthesis
110296366 (Rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110296366 (Rpn1)
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GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
FliD_C
MTR4_beta-barrel
CtIP_N
Motif
Other DBs
NCBI-GeneID:
110296366
NCBI-ProteinID:
XP_021020695
Ensembl:
MGP_CAROLIEiJ_G0028624
UniProt:
A0A6P5Q2H6
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Position
6:84182485..84201492
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AA seq
608 aa
AA seq
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MESXVAXQXLLLLCLGALAPTPGSASSEAPPLVNEEVKRTVDLSSHLAKVTAEVVLVHPG
GGSTSRASSFVLALEPELESRLAHLGVQIKGEDEEDNNLEVRETKIKGKSGRFFTVKLPV
ALDPGSKISVVVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVKLAS
RNVESYTKLGNPSRSEDVLDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHW
GNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGN
VSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHV
FDEQVIDSLTVKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQ
HIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACIT
EQVLTLVNKRLGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKAVTSEIAVLQSRLKT
EGSDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYLENEKLSSGKRQELVTK
IDHILDAL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcnggtcgccttncagttnctgctgctgctatgtctnggggccttagccccg
acgcccggcagcgcctcctcggaggctccgccgctggtcaacgaggaagtgaagcgcacg
gtggacctgagcagccacctagccaaggtgacggctgaggtggtcctggtacacccgggc
ggcggctccacatcacgagccagctctttcgttctggccctggagccagaactggagtcg
cggcttgcgcacctaggcgtgcagataaagggagaagatgaggaagacaacaacctagaa
gtccgagaaaccaaaattaaagggaaaagtgggagatttttcacggtcaagctcccagtt
gctcttgatcctgggtccaagatctcggtcgttgtggaaactgtctacacccatgtgctt
catccgtatccgactcagataactcagtcagagaaacagttcgtggtgtttgaaggcaac
cattatttctactctccctatccaacaaagacccagaccatgcgagtgaaactggcntcc
cgaaatgtggaaagctataccaagctggggaacccctctcgatctgaggacgtcctagat
tatggtccttttaaagacatccctgcctacagtcaggacactttcaaagtgcattacgag
aacaatagccctttcctgaccatcaccagtatgacccgggtcattgaggtgtctcactgg
ggcaatattgctgtggaagagaacgtggacttgaagcacacaggcgcagtgctgaagggg
cctttctcccgctacgattaccagaggcagcctgacagtgggatctcctccattcgttct
tttaagaccatccttcctgctgccgcccaggatgtctattaccgggatgagattggtaat
gtttccaccagccacctccttattttggatgactctgtggaaatggaaatccggcctcga
tttcctctctttggagggtggaagacacactacatcgttggttacaacctcccaagctat
gaatacctctataatctgggtgaccagtatgcactgaagatgcggtttgtagaccacgtg
tttgatgagcaagtgatagattcgctgacagtgaagatcatcttgcccgagggagccaag
aacatccaggtggacagtccctacgatatcagccgcgccccagacgagctgcattatacc
tacctagacacgttcggccgcccagtgatcgtggcttacaagaagaatctngtcgagcag
cacattcaggacattgtggtgcactacacgttcaacaaggttctcatgctgcaggagccg
ctgctggtcgtggccgccttctacatcctgttcttcactgtcatcatctacgtccgtctg
gacttttccatcaccaaggatccagctgcagaagccaggatgaaagtggcctgtatcaca
gagcaggtcttaaccctggtcaacaagaggctgggcctctaccgtcactttgatgagact
gtcaatagatacaagcagtcccgggatatctctaccctcaacagtggtaagaagagccta
gagacagagcacaaggctgtgaccagcgagattgctgtgctgcagtctaggctgaagacg
gagggctcggacctgtgtgacagggtgagcgagatgcagaagctggacgcccaggtcaag
gagctggtcctgaagtcggcggtagaagcagagaggctggtggctggcaagctcaagaag
gatacgtacctggagaacgagaagctcagctcaggaaaacgccaggagctggtcaccaag
atcgaccacatcctggatgctctgtag
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