Mus caroli (Ryukyu mouse): 110296557
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Entry
110296557 CDS
T05910
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110296557
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110296557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110296557
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110296557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
110296557
NCBI-ProteinID:
XP_021020920
Ensembl:
MGP_CAROLIEiJ_G0028674
UniProt:
A0A6P5Q350
LinkDB
All DBs
Position
6:complement(92157768..92159487)
Genome browser
AA seq
442 aa
AA seq
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MAKKNVKKEATGRNWQGDAEEEGTFSLASEDVLRNRTIKRAKRRHARPQPNGKGTSKGIK
SLAVPSGRGEFRGGPGEKPQEVLTTRRNAARAAAEPKAALGSVTANEPPSLEHEQISDAQ
TKVHSQQPVSPGLTFSQACAGSVYHRQXTGLNCSVRDWIVKHVNANPFCDLTPVFKQYEK
YLAAIEKQLHSSCGCLSEXEPNRGXVAATQPPFLAVATELQPELVISEKTEFMCEKKANS
AQGATSTSCNFGKNIETPAWGSLNSGPMHRVSSATRSSNVSGKGTTRKKPASAKALESPA
QGNSDECKGKRDEPPKVLLVEEEEEEEEEESVFYCKKCKLFYKKDNEFKEKGVGTLYLKS
TANQKTKLLVQDTKLGSTLLNILIPPDMPCSRMGKNNVLIVCVPDPPLDKKNATIKVTML
IRVKTSKDADELHKILLQKTDA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaaatgtcaagaaggaagcgacaggcaggaactggcaaggagacgccgaa
gaggagggaacattctcactggccagtgaggacgtcctgaggaatagaaccataaagaga
gccaagaggagacatgcccgcccccaacccaatggtaaagggacttccaaagggattaaa
agcttggctgtgccttccgggagaggagaatttagaggtggccctggagagaagccccag
gaagtattgacaaccagaaggaacgcagctagggctgcagcagagcccaaggcagccttg
ggttctgttactgcaaatgaacctccctctttggagcatgagcagatctcagatgcccag
actaaagttcacagtcagcagcctgtctccccgggcctcactttcagtcaagcctgtgct
gggagtgtctaccacaggcagttnactggcctgaactgctctgtccgagactggatagtg
aagcacgtgaacgccaatccgttctgcgatctgacgcccgtgtttaagcagtatgagaaa
tacttggctgccatcgaaaagcaactccacagcagttgcggctgtctctctgaaagngag
cctaaccggggcttngttgctgcgacacagcctcctttcctagcggttgccactgaacta
cagccagagttggtcatctctgaaaagactgagtttatgtgtgagaagaaagccaactca
gcacaaggagcaacgagtacctcctgtaactttggcaaaaacattgaaaccccagcttgg
ggttccctcaactctggtcccatgcaccgagtttcatcagccaccagaagctccaacgta
agtgggaaaggtaccacccggaagaagccagcatctgccaaagctctagagagtccagca
caaggcaacagtgatgaatgcaaaggtaaaagggatgagccacccaaagtgctccttgta
gaagaggaggaggaggaggaggaggaagagagtgttttttactgcaagaagtgtaaacta
ttctacaagaaagacaacgaatttaaagaaaaaggtgttggcacgctgtatttaaaatcc
acagccaatcagaagacgaagctcttagtgcaggatactaagttaggcagcacactcctg
aacattctgatcccacccgatatgccatgttcccggatggggaaaaataatgtcctcatc
gtctgtgtacccgacccaccgcttgataagaagaacgccaccatcaaggtcaccatgcta
attcgggtaaaaacaagtaaggatgcggatgaactgcacaaaattttactgcagaaaacg
gatgcctga
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