Mus caroli (Ryukyu mouse): 110296593
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Entry
110296593 CDS
T05910
Symbol
Ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110296593 (Ccdc174)
03041 Spliceosome [BR:
mcal03041
]
110296593 (Ccdc174)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110296593 (Ccdc174)
Spliceosome [BR:
mcal03041
]
Complex C
Other components
EJC/TREX
110296593 (Ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
110296593
NCBI-ProteinID:
XP_021020957
Ensembl:
MGP_CAROLIEiJ_G0028658
UniProt:
A0A6P5PYN3
LinkDB
All DBs
Position
6:87921481..87942520
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AA seq
469 aa
AA seq
DB search
MDRKKKPLDVTASSLVDLKAELFRKQEEFKQEKLLKDSGAFGKPKTINKKPSIWNKQNAG
VTSRAEKDAEQKLEEQKTLDKAREKLEEKAKLYEKMTKGDFLDEEVEDMYLVDFTQKIID
KRKEMEVLGATRESRMEEERDDDDDDEGEFSDKDIPPPQDPSEEWVDYVDSLGRSRRCMR
KDLPSLLEMDKNLQGRLFVSPANEKTLLSEDMRKELQRQQWEEEEREALKKPMGPIHYED
IRENEARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRIKRENIKEKRKAMLEARLA
KLRQKKMKKSKEDGTEEEGREADGVVPEPSEPKPVPAPAPVAQNSKVEVIIQERRDTKPG
VPHIREWDRGKDFSFGFWSKKQSELRAERDPEFAPPSNYFVGQKRTAPMSSQPWNRPGSA
PSDLGHSSGQSQEPSSSHTSTPAPESSPQAPTVTFQTLDDMISYYKQVT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaaagaaaaaacctttggacgttacagcctcctcgttggtagatcttaaggcg
gagctctttcgaaaacaagaagaattcaaacaagaaaaacttctaaaagattctggagct
tttggaaaaccaaagacaattaataagaagccaagtatctggaacaaacaaaatgcaggc
gttacaagtcgagcagagaaagacgctgaacagaagcttgaggagcagaagactttagac
aaagcaagggaaaaattggaagaaaaggccaaattatatgaaaagatgactaaaggagat
tttctagatgaggaagtggaggacatgtaccttgtggatttcacacagaagatcatagac
aagcgaaaagaaatggaggtgcttggtgccacgagagagtcccgaatggaggaagagaga
gatgatgatgatgatgatgaaggagagttttctgacaaagacatccctcctcctcaagac
cccagtgaggaatgggtggattacgtggactctttgggccgatcccggcgctgcatgaga
aaggatttaccaagtctgttggagatggataaaaatcttcaggggagactttttgttagt
cctgctaatgaaaaaactttgttatctgaagacatgaggaaagaacttcagcgtcagcaa
tgggaggaagaagaaagggaggccttgaaaaagccaatggggcccatccattatgaagac
atccgggaaaatgaggcccgacaacttggtgttgggtattttgcctttgcccgagacaaa
gagttaagaaacaagcaaatgaaaactttagagatgcttcgtgaacagacaacagatcag
agaataaaacgagaaaacataaaggaaaagagaaaagctatgttagaagcaagactggca
aagcttcgacaaaagaagatgaaaaaatcaaaagaggatggaactgaagaagaaggcaga
gaagcagatggagttgttcctgagccctcagagccaaagcctgtacctgccccagctcct
gtggcccagaacagcaaggtggaggtcatcatccaggagaggagggacaccaagcctggg
gtgccacacatccgagagtgggaccgagggaaagacttttcctttggattctggtcgaag
aagcagtcagaactccgagctgagcgagatcctgagtttgccccaccttcaaattacttt
gtgggtcaaaagagaactgctcctatgagtagccagccatggaacagaccaggatcagca
ccaagtgacttgggacattcctctggccagagccaggaacccagctcttcacacacatcc
actcctgcccctgaaagctcaccacaagcacccacagtcactttccaaacactagatgat
atgatatcttattataaacaagtcacatga
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