Mus caroli (Ryukyu mouse): 110296597
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Entry
110296597 CDS
T05910
Symbol
Pcgf1
Name
(RefSeq) polycomb group RING finger protein 1
KO
K11487
polycomb group RING finger protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03083
Polycomb repressive complex
mcal04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110296597 (Pcgf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110296597 (Pcgf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110296597 (Pcgf1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110296597 (Pcgf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
Rad60-SLD
zf-RING_5
zf-Nse
ATG8
Cobl
zf-ANAPC11
TRAF3_RING
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110296597
NCBI-ProteinID:
XP_021020960
Ensembl:
MGP_CAROLIEiJ_G0028540
UniProt:
A0A6P5Q379
LinkDB
All DBs
Position
6:79227407..79230176
Genome browser
AA seq
259 aa
AA seq
DB search
MASPQGGQIAIAMRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTI
TECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEE
KRIREFYQSRGLDRVSQPSGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGK
DKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNEVLPDHMTMKQLWLSR
WFGKPSPLLLQYSVKEKRR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctcaggggggccagattgcgatcgcgatgaggcttcggaaccagctccag
tcagtgtacaagatggacccactacggaacgaggaggaggtccgggtgaagatcaaagac
ctgaatgaacacatcgtttgctgcctgtgcgccggctacttcgtggatgccaccaccatc
acagagtgtctccacaccttctgcaaaagttgtatcgtgaagtacctgcaaaccagcaag
tactgccccatgtgcaacatcaagatccacgagacgcagccgttactcaatctcaaactg
gatcgggtcatgcaggacatagtgtataagctagtgccaggcttgcaagacagtgaagag
aaacggattcgggaattctatcagtcccgaggcttggacagagtctcccagcccagtggt
gaagagccagccctgagcaaccttggcctccccttcagcagttttgaccactctaaagcc
cactattatcgatatgatgaacagctgagcctatgcctggagcggctgagttctggcaaa
gacaagaataaaaatgtccttcagaacaagtacgttcgatgttctgttagagctgaggtc
cgccatctccgaagggttctgtgtcaccgactaatgctaaatccacaacatgtacagctc
ctttttgacaatgaggttctccctgatcacatgacaatgaaacagctatggctgtcccgc
tggttcggcaagccatctcctttgcttctccaatacagtgtgaaagagaagaggaggtag
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integrated database retrieval system
