Mus caroli (Ryukyu mouse): 110296659
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Entry
110296659 CDS
T05910
Symbol
Slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04081
Hormone signaling
mcal04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
110296659 (Slco1c1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110296659 (Slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110296659 (Slco1c1)
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
110296659 (Slco1c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
110296659
NCBI-ProteinID:
XP_021021041
Ensembl:
MGP_CAROLIEiJ_G0029026
UniProt:
A0A6P5Q3E3
LinkDB
All DBs
Position
6:139334707..139380683
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AA seq
716 aa
AA seq
DB search
MMDTSSKENAHLFHKNSAQPAGGPSFTAGYPSTEEARPCCGKLKVFLGALSFVYFAKALA
EGYLKSTVTQIERRFDIPSSLVGIIDGSFEIGNLLVITFVSYFGAKLHRPKIIGAGCLVM
GFGTMLIAVPQFFMEKYSYEKYERYSPSSNVTPSISPCYLESSSPSPSSILGKSQNKINH
DCEGDSSSSMWVYVFLGNLLRGLGETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGP
IFGFLLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLP
KTLPRSQSREDSGSSSEKSKFIDDPITYQMAPGDDKMKIMEMAKDFLPSLKTLFRNPVYI
LYLCASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKK
FRLGICEATKLYLGSSVFGYLLFLSLFALGCENSSVAGLTVSYQGTKPVSYHERALFSDC
NSRCKCSDSKWEPMCGDNGITYVSACLAGCQSSSRSGKNIIFSNCTCVGFAAPKSGNWSG
MMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAV
RVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSCRLYDSHAFRHIYLGLTTLLGTVSVFL
SMAVLFVLKKKYVSKHSSLITTREKIGMSSSIKKETCATRDRGLQPKYWPGKETRL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacctcatccaaagaaaatgcccatttgttccacaaaaattcagcgcagcct
gcgggagggccatcctttacagccggatatccgtccacagaggaagcgcggccatgctgt
ggaaaactcaaggtgttcttgggtgccctgtcttttgtttactttgccaaagcattggca
gaaggctatctgaagagcaccgttactcagatagagagaaggtttgatatcccttcctct
ctggtgggaataattgatggtagttttgaaatcgggaatctcctggtcataacgtttgtt
agctactttggcgccaaacttcacaggccaaaaataattggagcaggatgcctggtcatg
ggcttcggaaccatgctcattgctgtaccccagttcttcatggagaagtacagctatgag
aaatatgagaggtattccccgtcctccaatgttactcccagcatctctccgtgctacctg
gagtccagcagtccatcaccaagctcaatcctggggaaatcacagaacaaaataaatcac
gactgtgaaggggattccagctcctccatgtgggtttatgtcttcctgggaaatctcctc
cgaggattaggggagacgcctatccaacccctgggcatcgcctatctggatgactttgcc
agtgaagacaatgctgctttctacatcgggtgtgtgcagacagtggcaattataggaccc
atatttggcttccttttgggctcattatgcgcaaaactgtatgttgatattggctttgtg
aatctagaccatataactatcaccccaaaggatcctcagtgggtcggggcctggtggctt
ggttacctaatagctggattcctaagtctccttgcagctgttcctttctggtgcttaccc
aagactctaccaagatcccaaagtagagaggactctggctcctcatctgagaaatccaag
ttcatagatgaccctattacctaccaaatggcccctggagacgataaaatgaaaatcatg
gaaatggcaaaggattttcttccatcattgaagactctgtttagaaatccagtatacatc
ttatacttgtgcgcaagcactgttcagttcaattctctatttggcatggtcacatataaa
ccaaaatacattgagcagcagtatggacagtcttcttccaaagccaactttgtcattggg
ctcatcaacattcctgcagtggcccttggaatattctctgggggaatagttatgaagaaa
ttcaggctgggtatttgtgaagctacaaaactctacttgggatcatctgtctttggctac
ctcctcttcctctctctgtttgcactgggatgtgaaaattctagtgtggccggactgact
gtctcctaccaaggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgc
aactcaagatgtaaatgttcagactcaaaatgggagcccatgtgtggggacaacgggatt
acctatgtgtcggcttgtcttgctggctgtcaatcctccagccggagtggaaagaacatt
atattttctaactgcacttgtgtgggatttgcagcccccaagtcaggaaactggtcaggc
atgatgggcaggtgtcagaaagataatggatgttcccaaatgtttctatatttcctcgtg
atttcagtcatcacatcatatacattatctctaggtggcatacctggatatatattactc
ttgaggtgcattcaaccacaacttaaatcttttgctctgggtatctacaccttagcagta
agagttcttgcaggaatcccagcccctgtgtactttggtgttttgattgacacttcctgc
ctcaagtggggatttaagaaatgtggaagcagaggctcatgcagactatatgactcccac
gctttcagacacatatacctgggattaaccacgctcctgggcacagtgtctgtcttccta
agcatggctgtactttttgtcttaaagaaaaaatatgtgtcaaaacacagcagcttaata
accacaagagaaaaaatagggatgtcttcaagcatcaaaaaggagacatgcgctacaagg
gatcgtggattgcagcccaagtattggccaggcaaggagacacgactttaa
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