KEGG   Mus caroli (Ryukyu mouse): 110296828
Entry
110296828         CDS       T05910                                 
Symbol
Yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110296828 (Yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mcal01002]
    110296828 (Yod1)
Peptidases and inhibitors [BR:mcal01002]
 Cysteine peptidases
  Family C88
   110296828 (Yod1)
SSDB
Motif
Pfam: OTU OTU1_UBXL Ubiquitin_2 zf-C2H2_2
Other DBs
NCBI-GeneID: 110296828
NCBI-ProteinID: XP_021021277
Ensembl: MGP_CAROLIEiJ_G0014557
UniProt: A0A6P5Q3X6
LinkDB
Position
1:122297991..122302693
AA seq 343 aa
MFGGAKGGHFGVPPAGYSGAVPQAEAGTKAGPAGGRPADTMWRLRCKAKGGTHVLQGLSS
RTRLRELQGQIAAITGIAPGSQRILVGYPPECLDLSDRDITLGDLPIQSGDMLIVEEDQT
RPKASPAFSKHGAPSYVRETLPVLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRL
IAQIVASDPDLYSEAILGKTNEDYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVR
IDRFGEDAGYTKRVLLIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALELADEAR
RKRQFTDVNRFTLRCMVCQKGLTGQAEARDHARETGHTNFGEV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgtttggaggcgcaaaaggcggccattttggggtcccccccgctggttactccggcgct
gtcccccaggctgaggctgggaccaaggctggccccgcaggaggccggccggccgacact
atgtggcggctccgctgcaaggccaagggtggcacccacgttttgcagggtctttccagc
cggacccgcttacgggagctgcagggccaaatcgccgctatcaccggcatcgctccgggc
agtcagcgaatcctcgtcggctacccgcccgagtgcctggatctcagcgaccgggacatc
actcttggggacctgcccatccagtcaggtgacatgctgattgttgaagaagaccaaacc
agaccaaaagcttcacctgcgttttcaaaacatggtgctcctagttatgtcagggaaact
ctgcctgtgcttaccagaaccgcagtcccagcagacaactcttgcctctttaccagtgtg
tactatgtcgttgaaggaggagtcttgaatccagcttgtgcccctgagatgagacgactc
atagcacaaattgtagcaagtgatccagacttgtatagtgaggcgatactgggaaagaca
aacgaagactactgtgattggatcagaagggatgatacgtgggggggagcaatcgagatc
tcaatcctgtctaagttttaccaatgtgaaatatgtgtagtagatacacagacagtcaga
attgatcgttttggggaagatgcaggatataccaaaagagttctgcttatctacgatggc
attcactacgatccgcttcagcgtaacttccctgacccagatacccctcctctgaccatt
ttctcctcaaatgatgatattgttcttgtacaagcactggaattagctgatgaagctaga
agaaagagacaattcactgatgtaaaccgcttcaccctgagatgcatggtgtgtcagaag
ggcctaaccggacaagcagaagcaagggaccatgccagggagacaggccataccaacttt
ggagaggtgtga

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