Mus caroli (Ryukyu mouse): 110296834
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Entry
110296834 CDS
T05910
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110296834 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110296834 (Bhlhe40)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
110296834 (Bhlhe40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
110296834
NCBI-ProteinID:
XP_021021282
Ensembl:
MGP_CAROLIEiJ_G0028704
UniProt:
A0A6P5PS90
LinkDB
All DBs
Position
6:104025356..104031700
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AA seq
409 aa
AA seq
DB search
MERIPSAQPPPTCLPKAPGLEHGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNLEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGASRKPLDSAPKAVDLKEKPSFLAKGSEGPGKNCVPVIQRTFAPSGGEQSGSDTD
TDSGYGGELEKGDLRSEQPYFKSDHGRRFAVGERVSTIKQESEEPPTKKSRMQLSEEEGH
FAGSDLMGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNTSAA
ALSSFMNPDKTPLLLPQRLPSPLAHSSLDSSALLQALKQIPPLNLETKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacggatccccagcgcgcaaccacctcctacctgcctgcccaaagcgccagggctg
gagcacggagacctgtcagggatggattttgcccacatgtaccaagtatataagtccagg
cggggaataaaacggagcgaagacagcaaggaaacttacaaactgccgcaccggctgatt
gagaaaaagagacgtgaccggattaacgagtgcattgcccagctgaaggatctcctaccc
gaacatctcaaacttactactttgggtcacttggaaaaagcagtggttctggagcttacg
ttgaagcacgtgaaagcattgacaaatctaattgatcagcagcagcagaaaatcattgcc
ctgcagagcggtttacaagctggtgatttgtcgggaagaaatctcgaggcagggcaagaa
atgttctgctcaggtttccagacttgtgcccgtgaagtacttcagtacctggcgaagcat
gagaacactcgggacctgaaatcttcccagctcgtcactcatctccaccgtgtggtctcg
gagctgctgcagggtggtgcttccaggaaaccattggactcggctcccaaagccgtggac
ttgaaagagaagcctagcttcctagccaagggatcagaaggccctgggaaaaactgtgtg
ccagtcatccagaggacttttgctccctcgggtggggagcagagcggcagtgacacggac
acagacagtggctacggaggtgaattggagaagggggacttgcgcagtgagcagccgtac
ttcaaaagcgaccatggacgcaggttcgccgtgggagaacgtgtcagcacaattaagcaa
gaatccgaagagccccccaccaaaaagagccgaatgcagctctcggaagaggaaggtcac
ttcgcgggcagtgatctgatgggttccccatttcttgggccacacccacatcagcctccc
ttttgccttcccttctatctcatcccaccatctgccactgcctacctacctatgctggag
aaatgctggtaccccacctctgtgccagtgttatacccaggcctcaacacctcagctgca
gccctctccagcttcatgaacccagacaagactcccttgcttctgcctcagagactccct
tctcccttggcacattcgtccctcgactcttcggccttgctccaggctttgaagcagatc
cctcccttaaacttagaaaccaaagactaa
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