Mus caroli (Ryukyu mouse): 110296856
Help
Entry
110296856 CDS
T05910
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04621
NOD-like receptor signaling pathway
mcal05132
Salmonella infection
mcal05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110296856 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110296856 (Nod1)
05133 Pertussis
110296856 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110296856 (Nod1)
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110296856 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
RsgA_GTPase
AAA_22
Sigma54_CBD
ABC_tran
PIF1
AAA_25
Motif
Other DBs
NCBI-GeneID:
110296856
NCBI-ProteinID:
XP_021021302
Ensembl:
MGP_CAROLIEiJ_G0028408
UniProt:
A0A6P5PWH4
LinkDB
All DBs
Position
6:complement(49400435..49449032)
Genome browser
AA seq
953 aa
AA seq
DB search
MEERGHHEMEGTPSGCHSHIKLLKINREHLVTNIRNTQCLVDNLLENGYFSAEDAEIVCA
CPTKPDKVRKILDLVQSKGEEVSEFFLYVLQQLEDAYVDLRLWFSEIGFSPSQLIRTKTI
VNTDPVSRYTQQLRHQLGRDSKFMLCYAQKEDLLLEETYMDTLMELVGFNNENLGSLGGL
DCLLDHSTGVLNEHGETVFVFGDAGVGKSMLLQRLQSLWASGRLTSTAKFFFHFRCRMFS
CFKESDMLSLQDLLFKHFCYPEQDPEEVFSFLLRFPHTALFTFDGLDELHSDFDLSRVPD
SCCPWEPAHPLVLLANLLSGRLLKGAGKLLTARTGVEVPRQLLRKKVLLRGFSPSHLRAY
ARRMFPERTAQEHLLQQLDANPNLCSLCGVPLFCWIIFRCFQHFHTVFEGSSSQLPDCAV
TLTDVFLLVTEVHLNRTQPSSLVQRNTRSPAETLRAGWRTLHALGEVAHRGTDKSLFVFG
QEEVQASKLQEGDLQLGFLRALPDVGPEQGQSYEFFHLTLQAFFTAFFLVADDKVSTREL
LRFFREWTSPGEATSSSCHSSFFSLQCLGGRTRLGPDPFRNKDHFQFTNLFLCGLLAKAR
QKLLRQLVPKAILRRKRRALWAHLFASLRSYLKSLPRVQSGGFNQVHAMPTFLWMLRCIY
ETQSQKVGRLAARGISADYLKLAFCNACSADCSALSFVLHHFHRQLALDLDNNNLNDYGV
QELQPCFSRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL
DECRGLTHLKLGKNRITSEGGKCVALAVKNSTSIIDVGMWGNQIGDEGAKAFAEALRDHP
SLTTLSLALNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLQH
LWLIQNRITAKGTAQLARALQKNTAITEICLNGNLINPEEAKVFENEKRIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgcggccatcatgagatggaaggcaccccatcgggttgtcactcccacatt
aaactgctgaagatcaacagggaacatctggtcaccaacattcggaacactcagtgtctg
gtggacaacttgctggagaatggctacttctcagccgaagatgcagagattgtgtgtgcc
tgtcccaccaagcctgacaaggtccgaaagatccttgacctggtgcagagcaaaggtgag
gaggtgtctgagttcttcctctacgtgctgcagcagctggaggatgcttacgtggacctc
aggctgtggttctcagaaattggcttctccccttcccagctcattcggaccaaaactatc
gtcaatactgacccagtaagcaggtatacccaacagctgcgacaccaattgggccgcgac
tccaagttcatgctgtgctacgcccagaaggaggacctgctactggaggagacctatatg
gacacactcatggagctggtaggcttcaacaatgaaaacctgggcagcctaggaggcctg
gattgcctgctggaccacagtaccggcgtcctcaacgagcatggcgagactgtcttcgtg
ttcggggacgcaggagtgggcaagtccatgctgctgcagaggttgcagagcctctgggcg
tcgggcaggttgacctctacggccaaattcttcttccacttccgctgccgcatgttcagc
tgcttcaaggagagcgacatgctgagtctgcaggacctgctcttcaagcatttctgctac
ccggagcaggaccccgaggaggtgttctccttcttgctgcgctttccccacacagcgctc
ttcacttttgacggcctggatgagctgcactcagacttcgacctaagccgtgtgcctgat
agctgctgcccctgggagccggctcaccctctggtcctgctggctaacctcctaagtggg
aggctgctcaagggtgcgggcaaactgctcactgctcgcacaggcgtggaggtcccccgc
cagctcctgcgcaaaaaggtgctgctccggggcttctccccaagccacctgcgtgcctat
gcccgccggatgttccccgagcgcacagcgcaggagcatctgctgcagcagctggatgcc
aaccccaacctctgcagcctgtgcggggtgccgctcttctgttggatcatcttccgttgt
ttccagcacttccacacggtcttcgagggctcctcctcgcagttgccggactgtgctgtg
accctgaccgatgtctttctgctggtcactgaggtgcatctgaacaggacgcagcccagc
agcctggtgcagcgcaacacgcgcagcccggcggaaaccctacgtgcaggctggcgcacg
ctgcatgcgttgggagaggtggctcaccgaggcaccgacaagagcctctttgtgtttggc
caggaggaggtgcaggcgtcgaagctgcaggaaggagatctgcagctgggcttcctgcgg
gctttgcccgatgtgggccctgagcagggccagtcttacgaatttttccaccttacgctc
caggccttcttcaccgccttcttcctggtagcagatgacaaagtgagcacccgggagttg
ctgaggttctttcgagaatggacgtctcccggggaggcaacaagctcgtcctgccattct
tccttcttctccttacagtgcctgggcggcagaacccggttgggccctgatcctttcagg
aacaaagatcacttccaattcaccaacctcttcctgtgcgggctactggccaaagcccga
cagaaactccttcggcagctggtgcccaaggctatcctgaggaggaagcgcagagccctg
tgggctcacctgtttgccagcttgcgctcctacttgaagagcctacctcgggtccagtct
ggaggctttaaccaggtgcatgccatgcccacattcctgtggatgctgcgctgcatctat
gagacgcagagccagaaggtggggcgcctcgccgccaggggcatcagtgcggactacctc
aagctggccttctgcaacgcttgctctgcggactgcagcgccctgtccttcgtcctgcat
cacttccacaggcagctggccctagacctggacaacaacaacctcaatgactatggcgtg
caggagctgcagccttgctttagccgactcacggttatcagactcagcgtcaaccagatc
accgacactggggtgaaggtgctatgtgaggaactgaccaagtataagatcgtgacgttc
ctgggtttatacaacaaccagataactgatatcggagccaggtatgtggcccaaatcctg
gatgaatgcagaggcctcacgcaccttaaactagggaaaaacagaataacaagtgagggc
gggaagtgtgtggctttggctgtgaaaaacagcacctccatcattgatgttgggatgtgg
ggcaatcagattggagacgaaggggcaaaggccttcgcagaggcattgagggaccacccc
agcctgaccactctcagtcttgcattaaatggcatctctccggagggagggaagagcctt
gcacaggccctgaagcagaacaccacgctgacaataatctggctgaccaaaaatgaactt
aatgatgaggctgcagagtgcttcgctgagatgctgagggtgaaccagacgttacagcat
ttatggctgatccagaatcgcatcacagccaaggggacagcgcagctggccagggcattg
cagaagaacaccgccataacagagatttgtctcaatggaaacttgattaaccctgaggag
gccaaagtcttcgagaatgagaagagaatcatctgcttctga
DBGET
integrated database retrieval system
