Mus caroli (Ryukyu mouse): 110297069
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Entry
110297069 CDS
T05910
Symbol
Ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04330
Notch signaling pathway
mcal05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110297069 (Ncstn)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110297069 (Ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
110297069
NCBI-ProteinID:
XP_021021520
Ensembl:
MGP_CAROLIEiJ_G0014884
UniProt:
A0A6P5PY07
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All DBs
Position
1:complement(162337718..162354900)
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AA seq
708 aa
AA seq
DB search
MATTRGGSGPDPGSRGLLLLSFSVVLAGLCGGNSVERKIYIPLNKTAPCVRLLNATHQIG
CQSSISGDTGVIHVVEKEEDLKWVLTDGPNPPYMVLLEGKLFTRDVMEKLKGTTSRIAGL
AVTLAKPNSTSSFSPSVQCPNDGFGIYSNSYGPEFAHCKKTLWNELGNGLAYEDFSFPIF
LLEDENETKVIKQCYQDHNLGQNGSAPSFPLCAMQLFSHMHAVISTATCMRRSFIQSTFS
INPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAESAVAS
FVTQLAAAEALHKAPDVTTLSRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVRLENIDS
FVELGQVALRTSLDLWMHTDPMSQKNESVKNQVEDLLATLEKSGAGVPEVVLKRLAQSQA
LPPSSLQRFLRARNISGVVLADHSGSFHNRYYQSIYDTAENINVTYPEWQSPEEALNFVT
DTAKALANVATVLARALYELAGGTNFSSSIQADPQTVTRLLYGFLVRANNSWFQSILKHD
LRSYLDDRPLQHYIAVSSPTNTTYVVQYALANLTGKATNLTREQCQDPSKVPNESKDLYE
YSWVQGPWNSNKTERLPQCVRSTVRLARALSPAFELSQWSSTEYSTWAESRWKDIQARIF
LIASKELEFITLIVGFSILVFSLIVTYCINAKADVLFVAPREPGAVSY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctacgactaggggcggctctgggcctgacccaggaagtcggggtcttcttcttctg
tctttttccgtggtactggcaggattgtgtgggggaaactcagtggagaggaaaatctac
attcccttaaataaaacagctccttgtgtccgcctgctcaacgccactcatcagattggc
tgccagtcttcaattagtggggatacaggtgttatccatgtagtggagaaagaagaagac
ctgaagtgggtgttgaccgatggccccaaccccccttacatggttctgctggagggcaag
ctcttcaccagagatgtaatggagaagctgaaggggacaaccagtagaatcgctggtctt
gccgtgactctagccaagcccaactcaacttcaagcttctctcctagtgtgcaatgccca
aatgatgggtttggtatttactccaactcctacgggccagagtttgctcactgcaagaaa
acactgtggaatgaactgggcaatggcttggcttatgaagactttagtttccccatcttt
cttcttgaagatgagaacgaaaccaaggtcatcaagcagtgctatcaagatcacaacctg
ggtcagaatggctctgcaccaagcttcccattgtgtgctatgcagctcttctcacacatg
cacgccgtcatcagcactgccacctgcatgcggcgcagcttcatccagagcaccttcagc
atcaacccagaaatcgtctgtgaccccttatccgactacaacgtatggagcatgcttaag
cctataaatacatctgggggattagagcctgacgtcagggttgtggttgcggccacacgg
ctggatagccggtcctttttctggaatgtggccccaggggctgaaagtgctgtagcctcc
tttgtcactcagctggctgcagctgaagctttgcacaaggcacctgatgtgaccacccta
tcccgaaatgtgatgtttgtcttcttccagggggaaacttttgactacattggcagttca
cggatggtctatgatatggagaacggcaagtttcctgtgcggctcgagaatatcgactcg
ttcgtggagctgggacaggtggccttaagaacttcactagatctctggatgcacacagat
cccatgtctcagaaaaatgagtctgtgaaaaaccaggtggaggatcttctggccactctg
gagaagagcggtgctggtgtccctgaagttgtcctgaagagactggcccagtcccaggcc
cttccaccttcgtctctacaacgatttcttcgggctcgaaacatctctggcgtggtcttg
gctgaccactctggctccttccacaatcggtattaccagagcatttatgacacggctgag
aacattaatgtgacctatcctgagtggcagagcccagaagaggccctcaactttgtgaca
gacactgccaaggcactggcgaatgtggccacagtgctggcacgtgcactgtatgagctt
gcaggaggaaccaacttcagcagctccatccaggctgatccccagacagttacacgtctg
ctctatgggttcctggttagagctaacaactcatggtttcagtcgatcttgaaacatgac
ctaaggtcctatttggatgacaggcctcttcaacactacatcgccgtctccagccctacc
aacacgacttacgttgtgcagtatgccttggcaaacctgactggcaaggcgaccaacctc
acccgagagcagtgccaggatccaagtaaagtcccaaatgagagcaaggatttatatgaa
tactcatgggtacaaggcccttggaattccaacaagacagagaggctcccacagtgtgtg
cgctccacagtgcgactggccagggccttgtcccctgcctttgaactgagtcagtggagc
tccacagaatactctacatgggccgagagccgctggaaagacatccaagctcggatattc
ctaattgccagcaaagagcttgagttcatcacactgattgtgggcttcagcatccttgtc
ttctctctcatcgtcacctactgcatcaatgccaaagccgacgtccttttcgttgctccc
cgagagccaggagctgtgtcttactga
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