Mus caroli (Ryukyu mouse): 110297114
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Entry
110297114 CDS
T05910
Symbol
Lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04150
mTOR signaling pathway
mcal04310
Wnt signaling pathway
mcal04928
Parathyroid hormone synthesis, secretion and action
mcal05010
Alzheimer disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05200
Pathways in cancer
mcal05224
Breast cancer
mcal05225
Hepatocellular carcinoma
mcal05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110297114 (Lrp6)
04150 mTOR signaling pathway
110297114 (Lrp6)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
110297114 (Lrp6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110297114 (Lrp6)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110297114 (Lrp6)
05226 Gastric cancer
110297114 (Lrp6)
05224 Breast cancer
110297114 (Lrp6)
09164 Neurodegenerative disease
05010 Alzheimer disease
110297114 (Lrp6)
05022 Pathways of neurodegeneration - multiple diseases
110297114 (Lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110297114 (Lrp6)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110297114 (Lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
110297114
NCBI-ProteinID:
XP_021021557
Ensembl:
MGP_CAROLIEiJ_G0028978
UniProt:
A0A6P5PX42
LinkDB
All DBs
Position
6:complement(132432464..132547216)
Genome browser
AA seq
1613 aa
AA seq
DB search
MGAVLRSLLACSFCVLLRAAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVF
GHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFVIINTE
IYWPNGLTLDYQERKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWT
DWNTHSILACNKYTGEGLREIHSNIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMS
PVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTL
LGDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLKATSVHRVIGSNPCAEDNGGCS
HLCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVVASSVANQNLEIQPYDLS
IDIYSRYIYWTCEATNVIDVTRLDGRSVGVVLKGEQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQ
EYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGD
IDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQCIDGALRCNGDANCQDKSDEK
NCEVLCLIDQFRCANGQCVGKHKKCDHSVDCSDRSDELDCYPTEEPAPQATNTVGSVIGV
IVTIFVSGTIYFICQRMLCPRMKGDGETMTNDYVVHSPASVPLGYVPHPSSLSGSLPGMS
RGKSMISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPAILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRMTSVATAKGYTSDL
NYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtgctgaggagcctcctggcctgcagcttctgcgtgctgctgagagcggcc
cctttgttgctttatgcaaacagacgggacttgagattggttgatgctacaaatggcaaa
gagaatgcaacgattgtagttggaggcttggaggatgcagctgcggtggactttgtgttt
ggtcatggcttgatatactggagtgatgtcagcgaagaagccattaaacgaacagaattt
aacaaaactgagagtgtacagaatgttgttgtttctggattattgtccccggatgggctg
gcatgtgattggcttggagaaaaattgtactggacagattctgaaactaatcgtattgaa
gtttctaatttagatggatctttacgaaaagttttattttggcaagagttggatcaaccc
agagctattgccttagatccatcaagtgggttcatgtactggacagactggggagaagtg
ccaaagatagaacgtgctgggatggatggttcaagtcgcttcgttataataaacactgag
atttactggccaaacggactgactctggattatcaggagcggaagctttactgggccgat
gcaaaacttaatttcatccataaatcaaacctggatggaacaaatcggcaggcagtggtt
aaagggtcccttccacatccttttgccttgacgttatttgaggacacattgtactggact
gactggaatacacactctattttggcttgcaacaaatatactggcgagggtctgcgtgaa
attcattctaacatcttctctcccatggatatacatgctttcagccaacagaggcagcca
aatgctacaaatccatgtggaattgataatggtggttgttcccatttgtgtttgatgtct
ccagtcaagcctttttatcagtgtgcttgcccaactggggtcaagctgctagagaatgga
aagacctgcaaagatggtgccactgaactattgctgttagcccgacggacagacttgagg
cggatttctttggatacacccgattttactgacattgttctgcagttagaagatatccgg
catgccattgccatagactacgaccctgtagaaggctacatatactggacggatgacgaa
gtgagggctattcgtcgctccttcatagatggatctggcagtcagtttgtggtcacggcc
cagattgctcatcctgatggtattgctgttgactgggttgcaaggaacctgtactggaca
gacactggcacggatcgtatagaagtgacaaggctcaatgggaccatgaggaagatcttg
atttcagaggacttagaggagccccgggctatcgtgttagatcccatggttgggtacatg
tattggacagactggggagaaatcccaaaaatagagcgagctgctctggacggatctgac
cgagtagttcttgtcaacacttcccttggttggccaaatggcttagccctggattatgat
gaaggcacaatatactggggagatgccaaaacagacaaaattgaggttatgaataccgat
ggcaccgggaggcgagtgctggtggaagacaagatccctcacatatttgggtttaccttg
ctgggtgactatgtttactggactgactggcagaggcggagcatcgagagagtacacaaa
cggagcgcagagagggaggtcatcatagaccagctgccagacctcatgggactgaaggcc
acaagtgttcacagagtcattggttctaacccctgtgctgaggacaatggaggatgcagc
catctttgcctgtacaggcctcaggggcttcgatgcgcctgtcccattggctttgagctc
atcagtgacatgaagacatgcattgtccccgaggctttccttctgttctctcggagagcg
gatatcagacgcatatctttggaaacaaacaacaacaatgtggccattcctctcactggt
gtcaaagaagcctctgctttggattttgatgtcacagacaacaggatttactggactgat
atatcactgaagactattagcagagcctttatgaatggcagtgcactggaacatgtggta
gagtttggcttagattatccagaaggcatggcagtggactggcttgggaagaacttatac
tgggcagacacaggaacaaatcgtattgaggtatcaaagttggacggacagcaccgacag
gttttggtatggaaagaccttgacagtcctcgagctctggcactggatcctgcagaaggg
tttatgtattggactgagtggggaggcaagcctaagattgacagggctgctatggatgga
agtgaacgcactacattagttccaaatgtgggccgagccaatggtctcaccatcgactat
gctaaaaggcggctttactggacagacctggacactaacctaatagaatcctcaaatatg
ctcggactcaaccgtgaagttatagcagatgacttgcctcatccttttggcttaactcag
taccaagattatatctactggacagactggagccgacgcagcattgaacgtgccaacaaa
accagtggccaaaaccgcaccatcatccagggccatttggactatgtgatggacatcctg
gtcttccactcttcccggcaggcagggtggaatgaatgtgcctccagcaacgggcactgc
tcccacctctgcttggctgtgcccgtcggaggttttgtgtgtggatgccctgcccactac
tccctgaatgctgacaacaggacctgcagtgctcctaccaccttcctgctcttcagtcag
aagagcgccatcaaccgcatggtgattgatgaacaacagagccctgacatcatccttcct
atccacagccttcggaacgtccgggccattgattatgaccctttggacaagcagctctac
tggattgactctcgacaaaactccatacgaaaggcacatgaagatggtggccagggtttt
aatgtagttgcaagctcagtcgcaaatcagaatcttgaaatacagccctatgatctcagc
attgatatttatagccgttacatctactggacctgtgaagctaccaatgtcattgatgtg
acgagattagatggacggtcagttggagtggttctaaaaggcgagcaagacagacctcga
gccattgtggtaaaccccgagaaagggtatatgtattttaccaatcttcaggaaagatct
cctaaaattgaacgggctgcattggatggtacagaacgagaggtcctctttttcagtggc
ttaagtaaaccaattgctttggctcttgatagcaagctgggcaagctcttctgggctgac
tcagatctccggcgaattgaaagcagtgatctctcaggtgccaacaggatagtgctagaa
gactctaatatattacaacctgtgggcctgaccgtgtttgaaaactggctctattggatt
gataaacagcagcagatgattgaaaaaattgacatgactggtcgagaaggaagaaccaag
gtccaggctcgaattgctcagctgagtgacatccatgcagtaaaggagctgaaccttcag
gagtacagacagcacccttgtgcccaggataatggtggctgttcacatatttgccttgta
aaaggagatggtacgacaagatgctcctgccccatgcacttagttctgcttcaggatgag
ctgtcctgtggagagcctccaacgtgttctcctcagcagtttacctgcttcactggggac
attgactgcatccctgtggcttggcggtgtgatgggttcactgaatgcgaagaccacagt
gatgaactcaattgtcctgtgtgctcagagtctcagttccagtgtgccagtgggcagtgc
attgatggtgcccttcgatgcaatggtgatgcgaactgccaggacaaatcagatgagaag
aactgtgaagtgctttgtttaattgatcagttccgctgtgccaatggtcagtgcgttgga
aaacacaagaaatgtgaccacagtgtggactgcagtgacagatctgacgagctggactgt
tatccaactgaggagccagcaccacaagccaccaacacagttggttccgttattggagta
attgtcaccatttttgtgtctggaaccatatactttatctgccagaggatgctgtgtcct
cgtatgaagggagacggggagaccatgactaacgactatgtggttcacagcccggcttct
gtgccccttggttatgttcctcacccaagctctctctctggatctcttccaggaatgtct
cgaggcaaatcaatgatcagttccctcagtatcatggggggaagcagtgggcccccctat
gatcgagcgcacgtcacgggagcatcctcaagcagttcttccagtaccaaaggcacttat
ttccctgcaattttgaacccaccaccatcgcctgccacagaaagatcccattacaccatg
gaatttggttattcttccaacagtccttccacacataggtcctacagctataggccgtac
agctaccggcactttgcaccgcccaccacaccctgcagcactgatgtctgtgacagtgac
tatgctcctagccggaggatgacctcagtggcaacagccaagggctacaccagtgacttg
aactatgactcagaacctgtgcccccaccgcccacaccccgaagccagtacttgtcagcg
gaggagaactatgaaagctgtcccccttccccatacacggagaggagttactcccaccac
ctctacccgccaccaccctccccctgcacggactcctcctga
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integrated database retrieval system