Mus caroli (Ryukyu mouse): 110297271
Help
Entry
110297271 CDS
T05910
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04517
IgSF CAM signaling
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110297271 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110297271 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110297271 (Sptbn4)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110297271 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
110297271 (Sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
FlgK_D1
Helical_needle
PH_11
FAM133
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110297271
NCBI-ProteinID:
XP_021021678
Ensembl:
MGP_CAROLIEiJ_G0029411
UniProt:
A0A6P5PT69
LinkDB
All DBs
Position
7:complement(26610704..26703448)
Genome browser
AA seq
1241 aa
AA seq
DB search
MLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKK
LGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLAT
VNSQLKKLQSMESQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLEPL
QERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGTGLQAVQQHIKKNQGLRREI
QAHGPRLEEVLERAGVLASLRSPEAEAVRRGQEQLQSAWTGLREAAERRQQTLDAAFQVE
QYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQC
RALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIA
EKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAAT
MAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPP
EPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGW
KELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYH
QGLKTELEARVPELAACQELGRSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWL
QQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERF
SSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDRGLEPLARRA
SDTLSAEVRTRVGYVRQELKPERLQPRIDRLPETSGKVEPAAPAAAALDTTDTPGTPAAT
EQVRPRSERQELADRAEELPRRRRSERQESVDQPEETARRRRPERQESADHEGPHSLTLG
RYEQMERRRERRERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGIPAGVP
SLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPA
QGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKGP
ASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVA
NSVAEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggctcgtgatggcacccgggaagatagccacaagctgcacaagagatggctc
cggcaccaggcgttcatggctgagctggctcagaataaggagtggctggagaagatagaa
agggagggccagcaactgatgcaggagaaaccggagctggcagcctctgtgcgcaagaaa
ttaggtgagatccggcagtgctgggcggagctggagagcaccacacaggccaaggcgcgc
cagctcttcgaggccagcaaggcagaccagctagtgcagagctttgcagaactggacaag
aggctgcttcacatggaaagccagctgcaagacgtagaccccggtggggacctggccact
gtcaacagccagctcaagaagttacagtccatggagtctcaggtggaggagtggtgccga
gaggtgggcgagcttcaagcgcagacggcagcgcttccgctggagcaggcgagcaaggag
ttggtgggggagcggcagagtgcagtgggcgagcgcctggtgcgcctgctggagcctttg
caggagcgacgccgcttgttgctggcatccaaggagctgcatcaggtggcgcacgaccta
gacgatgaactggcatgggttcaagagcggttgccactggccatgcagacagagcgaggc
actggcttgcaggctgtccagcagcacatcaaaaagaaccagggcctgcgacgggagatc
caggctcacgggccgcgcttggaggaggtgctggagcgcgcgggcgtcctggcctcgctg
cgcagcccagaggccgaagcggtgcgccgtggccaagagcagctgcagagcgcctggacc
ggactgcgggaagcggccgaacggcggcaacagacgctggacgccgccttccaggtggaa
cagtactactttgacgtggctgaggtggaggcatggctgggcgagcaggagctgctcatg
atgagtgaggacaagggcaaggatgaacagagcaccctgcagctgctcaagaagcattta
caactggaacagggcgtggagaactatgaggaaagcatcgcccagctgtcacgccagtgc
cgggcgctactagaaatgggacacccagacagtgagcaaatcagtcgccgacagtcccaa
gtggatcgcctctatgtggcgctcaaggagctgggtgaggagcgcagggtgagcctggaa
cagcagtactggctatatcagctcagccgtcaggtggatgagctggagcactggatagcc
gagaaggaggtggtagctggctccccggagctgggccaggactttgaacacgtatcggtg
ctacaggagaaattctcagagtttgccagtgagacaggaaccgcagggcgggagcggctg
gcggcggtcaaccagatggtggacgagctgattgagtgtggtcacacagcggcggccacc
atggccgagtggaaggacgggctgaacgaggcctgggctgagctgctggaactcatgggc
actcgggcccagctgctcgctgcctctcgggagctgcataagttcttcagcgatgcccgg
gagcttcaagggcagatcgaggagaagcggaggaggctgccccgcctgacggcaccacct
gaacccagacccagcgccagctccatgcagcggacccttcgagcctttgagcacgacctg
cagctcctcgtatcccaggtacggcagctgcaggagggggcggcccagctgcggacggtg
tacgcgggcgagcacgccgaggccatcgccagccgcgagcaggaggtgttgcagggctgg
aaggagctgctagcagcctgtgaggatgctcgtctgcacgtcagctccacggccgacgcc
ctgcgcttccacagccaggcacgcgacctgctctcctggatggacggcatcgcgggccag
atcggggcagctgacaaacccagggatgtgtcatcggtggaggtgcttatgaactaccac
cagggcctgaagacagagttggaggcgcgcgtgcctgagctggcagcctgccaggagctg
gggcgttctctattactcaacaaaagcgccatggctgatgagatccaggcccagctggac
aagctgggaagccggaaggaggaggtgtcggagaagtgggaccgtcactgggagtggctg
cagcagatgctggaggtacaccagtttgctcaggaggccgtggtggctgacgcctggctg
acagctcaggagccgctcctgcagagccgggagctgggcagcagcgtggatgaggtggag
cagcttatccggcgacacgaggccttccggaaagcagctgcggcctgggaggagaggttc
agctctctgcggcgcttgaccacgatcgagaaactcaaggcagaacagagtaagcagcca
cccacccccttactggggcgcaagttctttggggaccccacagagctggcggccaaggca
gcgcctttgctgcgtccagggggctatgacaggggcctggagcctttggcccgcagggcc
tcggacacgctgtcagcggaggtgcggacccgggttgggtatgtgcgccaggagctcaag
cctgagcgtctccagccgcgcattgaccggctgccagagacctccgggaaggtagaaccc
gcggccccggcagccgcagcgttggacacgacggacacccctgggactccggcggcgacg
gaacaggtccggccccggtcggagcgccaggagttagcggatcgtgcggaggagctgcca
cggagacgaagatcagaacgccaggagtccgtggatcaaccagaggagacagcgcggagg
cggcggcctgagcgccaggagtccgcggaccacgaggggccgcacagccttactctaggt
cgctacgagcagatggagagacggcgggagcggcgggagcggcggatagaacgacaggag
tctagcgaacaggagactcccaccaggggagagctggtcaaagggaaggccactctggct
gatattgtggagcaacttcaggagaaagaggcaggcccagggatccctgctggggtgccg
tcgctgcctcagcctcgcgagcttccccctggtcgcctgcccaacgggcttgagccgccc
gagcggacacctcggcccgatcggccgcgggcacgggaccggcccaagccgcgccggcgg
ccacggcctcgagagggtggtgagggcgggggaagccggcgctcgcgctccgcccctgcc
cagggaggctccgcccccgcgcctccacctccgcccactcacacagtgcagcacgagggc
ttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcttgggtg
agcctgtactgtgtgctcagcaagggggagctgggcttctacaaggactccaaaggccca
gcctcagggggcacgcatggtggggaaccactgctcagcctgcacaaagccaccagcgag
gtggctagtgactacaagaaaaagaagcatgtcttcaagctccaaacccaggatggcagt
gagttcttgctccaggctaaagatgaggaggagatgaacggctggctggaggctgtggct
aactccgtggcagaacacgcagagatcgcccgatggggtcagacactacctaccacatca
tccacagatgagggcaaccccaagcgtgagggcggggaacgtagggccagcgggcgccgg
aagtga
DBGET
integrated database retrieval system
