Mus caroli (Ryukyu mouse): 110297303
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Entry
110297303 CDS
T05910
Symbol
Sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110297303 (Sox6)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110297303 (Sox6)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110297303
NCBI-ProteinID:
XP_021021718
Ensembl:
MGP_CAROLIEiJ_G0030353
UniProt:
A0A6P5PXG9
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Position
7:complement(117705046..118260038)
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AA seq
635 aa
AA seq
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MITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINL
LQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTM
AAAAASGLSPLQLQKGHVSHPQINPRLKGISDRFGRNLDPSEHGGGHSYNHRQIEQLYAA
QLASMQVSPGAKMPSTPQPPNSAGAVSPTGIKNEKRGTSPVTQVKDETTAQPLNLSSRPK
TAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQQQPHGVDGKLSSMNNMGLSNCRTEKERTRFENLGPQL
TGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARG
RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE
QARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQM
PITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKMDGASLAGND
MINGEDEMEAYDDYEDDPKSDYSSENEAPEPVSAN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgattacccagctgatcagcttgcgggagcagctcctggcagctcacgatgaacagaaa
aagctggcagcatcgcagatcgagaaacagcggcagcaaatggaccttgctcgccaacag
caagaacagatcgcaagacaacagcagcaacttctacagcagcagcacaagattaatctc
ctgcagcaacagatccagcaggttcaggggcacatgcctccgctcatgatcccaattttt
ccacatgaccagcggaccttggcagcagctgctgctgcccaacagggattcctgttcccc
cctggaataacatacaagccaggtgataactaccccgtacagttcattccgtcaacaatg
gcagctgctgctgcttctggactcagccctttacagcttcagaagggtcatgtttcccac
ccacaaattaacccaaggctaaagggcataagtgaccgttttggcaggaatttggacccc
tctgaacatggtggtggccactcttacaaccacagacagattgagcagctctatgccgct
cagctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccacca
aactcggcaggggcagtctcacctactgggataaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggatgaaacaacagcccagccgctgaatctctcatcccggcctaag
acagcggagcctgtgaagtccccaacatctcccacccagaacctcttcccagccagcaaa
accagccctgtcaacctgccaaacaaaagcagcatccccagccccattggaggaagcctg
gggagaggatcctctttagatatactatccagtctcaactctcctgccctgtttggggac
caggacacagtgatgaaagccattcaggaggctcggaagatgcgagaacagatccagcgg
gagcagcaacagcagccacacggagttgatgggaaactgtcctccatgaacaacatgggg
ctgagcaactgcaggactgagaaggaaagaacccgctttgagaacctgggtccccaatta
acaggaaagtcaagtgaagatggaaagctgggcccgggtgtcatcgatctcactcggcca
gaggacgcagaaggaagcaaagcaatgaatggctctgcagctaaactacagcagtattat
tgttggccaacaggaggcgccactgtggctgaagcccgtgtctacagggatgcccgcggc
cgtgccagcagcgaaccccacatcaagcgaccaatgaatgcgttcatggtttgggcaaag
gacgaaaggaggaaaattcttcaggccttccctgacatgcataactccaacattagcaaa
atcttaggatctcgctggaaatccatgtccaaccaggagaagcaaccttactatgaagaa
caggcccggctaagcaaaatccacctagagaagtacccaaactacaagtacaaaccccgg
ccgaagcgcacatgcatcgtggatggcaagaagctccggattggggagtacaagcagctg
atgcgctcgcgaaggcaggagatgcggcagttcttcactgtggggcaacagcctcagatg
cccatcaccacaggaacaggtgttgtgtatcctggtgctattactatggcaacgaccaca
ccatcacctcagatgacatctgactgctctagcacctctgccagccccgagcccagcctc
cctgtcatccagagcacgtatggtatgaagatggacggcgcaagcctggctgggaacgac
atgattaatggagaggatgaaatggaagcctatgacgactacgaagatgatcccaaatca
gactatagcagcgagaacgaggccccagagcctgtcagtgccaactga
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