Mus caroli (Ryukyu mouse): 110297408
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Entry
110297408 CDS
T05910
Symbol
Nlrp5
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 5
KO
K22626
NACHT, LRR and PYD domains-containing protein 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110297408 (Nlrp5)
04054 Pattern recognition receptors [BR:
mcal04054
]
110297408 (Nlrp5)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
110297408 (Nlrp5)
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110297408 (Nlrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
NOD2_WH
NPHP3_N
nSTAND3
AAA_16
LRR_4
NB-ARC
AAA_25
AAA
AAA_22
Herpes_UL73
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
110297408
NCBI-ProteinID:
XP_021021810
UniProt:
A0A6P5PTF6
LinkDB
All DBs
Position
7:22669105..22707898
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AA seq
1185 aa
AA seq
DB search
MLGLRQKEPLQSEAFINTNPSEESLWTKSPEQRKSLAFKSGSSTPESSFIKLTRKNKNRD
SRLDSCGFTPASCHLLVSALFSNQNLTHLCLSNNSLGTEGVQQLCQFLRNPECALQRLIT
AVSVKCLYHLGGCSGNEINTEHLEKHQEVTSISVERKMTSPENDSKSIQKDXGPEVEQTS
ESTMSPSENDSRAILKDNGSEEVEQTSESTISPSENDSKTILKDHGSEEVEQMSARDMSS
EEYDTKXILKDKRSEQEQTLDNGGYLQDYKTHMIAKFDTSVDLYYDSPEVKLLSDAFKPY
QKTFQPHTIILHGRPGVGKSVLARSIVLDWAQDKLFQKMSYFGTVNFSVREIKWTEKSSL
VQLIAKEWPDSWAPVTNIMSQPERLLLVIDGLDDMDSVLQHDDMTLSRDWKDEXPIYILM
YSLLRKALLPQSFLIGTTRNTGLEKLKSMVVSPLYILVEALSASRRSQLVLENISNEYER
MQVFHSLIENHQLFDQCQAPSVCSLVCEALQLQKNLGKRCTLPCQTLTGLYAMLVFHQLT
LRRPSQSALSQEEQITLVGLCTMAAEGVWAIRSVFXDDDLKTYSLKKSEILTLFHMNILL
QVGHNSEQCYIFFHLSLQDFFAALYYVLEGLGEWNQHLCFIKNQRSIMEVKRTDNTHFLR
MKRFLFGLMNKDILKXLEVLFECPMIPTVEQELQHWVSLIGQQVNGTSPVDTLDAFYYLX
ESQDFVHMALNSFQEVWLLINQKMDFKVSSYCLKHCXNLKAIWVDIRDLFSVDNTHELCP
VVALQETQCKPLLMEWWGNFCSVLGSHWNLKELDLGNSILSQWAMKILCLELXNQSCRIQ
KMTXVFKSAEVVSGLKHLWKLLFSNQNXYLNLGNTPMKDDDMKLACEALKHPKCSLETLR
LDSCELTLIGYEMISTLLISSSSLKCLSLAKNTVGVKSMISLGNALSSSTCPLQKLILDS
YGLTHASCHLLVSSLFSNQNLTHLCLSNNSLGTEGVQLLCQFLRNPECALQRLILNHCNI
VDDAYSFLALRLANNTKLTHLSLTMNPVGDDAMKLLCEALKEPTCYLXELELVDCQLTQN
CCEDLACMITTTKHLKSLDLGNNTLGDKGVITLCEGLKQSISSLRRLGLGACRLTSKCCE
ALSLALSCNPHLNSLNLVKNDFSTSGKLKLCSAFQSPVSNLXIIG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcttgcgtcaaaaggagcctcttcagagtgaggccttcattaacacaaatccc
tctgaggagtctctgtggaccaaatccccagaacaaaggaaaagcctggcttttaagagt
gggtcctccaccccagagtctagctttatcaagctgacaagaaaaaacaaaaatagagac
agcagactggacagctgtggcttcacacctgccagctgccacctcctggtctcagccctt
ttcagcaaccagaacttgactcacctgtgcctgtcaaacaacagcctggggactgaagga
gtgcaacagctgtgtcagttcctgaggaatccagaatgtgctctccagcggctgatcact
gcagtatctgtgaaatgtttgtatcacctcggaggatgtagtgggaatgaaataaacaca
gagcatttagaaaagcatcaggaagtcacgtcgatcagtgtggaaagaaaaatgacttct
ccagaaaacgatagtaaatcaatccagaaagactaaggaccagaggttgagcagacatca
gaaagcacaatgtctccttcagaaaatgacagtagagcaatcctgaaagacaatggatca
gaagaagtggaacagacttcagaaagcacaatatctccttcagaaaatgacagtaaaaca
atcctgaaagaccatggatcagaagaagtggaacagatgtcagctagagacatgagttca
gaggaatatgacactaaantcatcctgaaagacaaaagatcagagcaagagcagacatta
gataatggaggttacctacaagactacaagacccatatgatagctaagttcgacacaagt
gtggatctatactatgacagcccagaggtgaaattattgtctgatgcttttaaaccatac
cagaaaaccttccagcctcacaccattatcctacatggaagaccaggagttggaaagtca
gttttagccagaagtattgttctggactgggcacaggataaactcttccaaaaaatgtcc
tattttggtacagttaatttctctgttagagaaataaagtggacagagaagagcagtttg
gtacagttgattgccaaggagtggccagactcctgggctccagtgacaaacatcatgtct
caaccagaaagactcttgcttgtcatagatggcttggatgatatggactctgtcctccaa
catgatgatatgacactatccagagactggaaggatgaatagcccatatatatcctgatg
tacagcctcctgaggaaggccctcctaccccagtcctttctcatcggtaccaccagaaac
acaggcttagaaaaactcaagtcaatggttgtgtcccccctctatatactggttgaagca
ctgtctgcatcaaggagatctcagctggtcctcgagaacatctcgaatgagtatgagaga
atgcaagtcttccactctctgatagaaaatcaccagctgtttgaccaatgccaggccccc
tctgtgtgctccctggtgtgtgaggctctacagctacagaagaatttgggaaagagatgc
accctaccctgccagactctcactggtttgtatgccatgttggtgttccaccaactcacc
ttgagaaggccttcccagagcgctctcagtcaggaagaacaaattactctagtgggtttg
tgcacgatggcagctgaaggagtgtgggccataaggtcggtgttctaagatgatgacctg
aagacctatagcctaaagaagtctgagatcttgaccctctttcacatgaacatccttctc
caggttggccacaacagtgagcagtgttatattttcttccacctcagcctgcaggatttc
tttgctgccttatattatgttttagaagggctaggggaatggaatcagcatctttgcttc
attaaaaaccaaaggagcatcatggaggtgaagagaaccgacaatactcacttcctcagg
atgaagcgtttcttatttggcctcatgaacaaggatatcttgaagnctctggaggttctg
tttgaatgtcccatgattccaactgttgagcaggagctccaacactgggtctctctgata
ggtcagcaggtcaatggcaccagcccggtggacaccctggatgccttctattatctantt
gagtctcaggactttgttcacatggctctcaacagcttccaagaagtgtggctgctgatt
aaccagaagatggactttaaggtatcttcctactgtctcaagcattgttagaacttgaag
gcaatctgggtggatatcagagacctcttctcagtggataacactcatgagctgtgccct
gttgttgctctccaagagacacaatgtaagcccctcctcatggagtggtggggaaacttc
tgctctgtgcttggcagccactggaacttgaaggagctggacttgggtaacagcatcctg
agtcaatgggccatgaagatactgtgccttgagctgtagaatcagtcctgcagaatacag
aagatgacctaagtgtttaagagtgcagaggtagtgtctggcctgaaacatctctggaag
ctcctttttagcaatcagaacntttacctcaatctagggaacactcccatgaaggatgat
gacatgaagttagcctgtgaagcactgaaacatccaaagtgctccctggagactctgagg
ttggattcctgtgagttaaccctcattggctatgagatgatctccacgcttcttatttca
tcctccagcctaaagtgtctcagcctggccaaaaatacagtgggagtaaaaagcatgata
tcccttgggaatgccttgagtagctcaacgtgtccactgcaaaagttgatactggacagc
tatggcctcacacatgccagctgccaccttctggtctcatcccttttcagcaaccagaac
ttgactcacctgtgcctgtcaaacaacagcctggggactgaaggagtgcaactgctgtgt
cagttcctgaggaatccagaatgtgctctccagcggctgatactgaatcactgcaacatt
gtagatgatgcttacagcttcctggcattgagacttgcaaacaacacaaagctgacgcac
ctgagcctgaccatgaaccctgtaggggatgatgcaatgaagctactgtgtgaagcttta
aaggaacctacttgttaccttnaagaactggaactagtggactgccaacttacacagaac
tgctgtgaggacctggcctgtatgatcacaacaaccaagcacttaaaaagtttggatctt
ggtaacaacaccctgggtgacaaaggagtcataaccctgtgtgagggactgaagcaaagt
atcagctccctgaggagacttgggttgggggcatgtaggttgacttccaaatgctgtgag
gcattgtcattggccctctcttgcaaccctcacctgaacagtctaaacctggtgaagaat
gacttcagtacatcagggaagttgaagctgtgctctgcgttccaaagccctgtctctaac
ctgtagataattgggtaa
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integrated database retrieval system
