Mus caroli (Ryukyu mouse): 110297531
Help
Entry
110297531 CDS
T05910
Symbol
Rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110297531 (Rnf40)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110297531 (Rnf40)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
110297531 (Rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
110297531
NCBI-ProteinID:
XP_021021981
Ensembl:
MGP_CAROLIEiJ_G0030512
UniProt:
A0A6P5PY05
LinkDB
All DBs
Position
7:129629533..129645038
Genome browser
AA seq
1012 aa
AA seq
DB search
MSGLSNKRAAGDGGSGPPEKKMNREEKTTTTLIEPIRLGGISSTEEMDSKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLQCYENQRELSS
GTEVPGCQESLTRDVIPRTDPGTSDLREPLPVQFRAPLSEPALAFVVALGASSCEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRQVEELCQRVYSRGFGSHPGFAFPGDSEAPGEVARVR
TRELGRENRRLQDLATQLQEKHHRISLEYSELQDKVTSTETKVLEMETTVEDLQWDIEKL
RKREQKLNKHLAEALEQLNSGYYVSGSSTGFQGGQITLSMQKFEMLNAELEENQELANSR
MAELEKLQVELQGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQL
DEARGLLLASKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQN
LAANEQAGPINREMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIAKLRAQASGSSHCI
PTLSHPDDPGLSALAPGKEDSGPGPGGTPDSKKEMALVAGATSATSSIKKEELVSSEDDA
QALTPVTQGLPSRGREPEARPKRELREREGPSLGPPPAASTLSRADREKAKVEEAKRKES
DLLKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRE
LEERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQ
EQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQ
KLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQP
CLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCP
CCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctcagcaacaagcgcgccgccggcgacgggggctcaggacccccagagaag
aagatgaaccgcgaggagaagaccacgaccactctaatcgaacccattcgtctcgggggc
atttcttccacggaggagatggattccaaggtactgcagttcaagaacaagaagctggcg
gagcggttggagcagcggcaagcctgcgaggatgagctccgggagagaattgagaaactg
gagaagaggcaggccaccgacgatgccacactcctcatcgtcaaccgctactgggcccag
ctggatgaaactgtggaagcccttctccagtgctacgagaaccagagggagctgtcctca
gggacagaggtgcctgggtgccaagagagcctaacccgtgatgtgatccctcgaacagac
ccggggacgtcagatctgagggaaccgctgccagtgcagtttcgagcccctctcagtgag
ccggctttggcttttgtggtggcactgggcgccagcagctgtgaggaagtggagctgcag
ctgcagggtcggatggaattctccaaggctgcagtgtctcgggtggtcgaggcctcggac
cgccttcaacggcaggtggaagaactctgtcagcgagtatacagccgggggtttggctct
catccaggctttgcattcccaggggacagtgaggcccctggggaggtggcacgggtgcgc
acccgggagctaggcagagagaaccgtaggctacaggacttggccactcagctgcaagag
aaacaccaccgcatctcattggagtactctgagctccaagataaagtgacatcgacagag
accaaggtcctagaaatggagaccacagtggaggacctgcagtgggacattgagaagctg
cgcaagcgagaacagaagctcaataagcacttggcagaggccttggagcagctcaactcc
ggctactatgtgtctgggagctccacaggctttcagggaggccagattacactcagcatg
cagaagtttgagatgttgaatgcagagctggaagaaaatcaggaattggccaatagccga
atggcagagctggagaagctgcaggtggagcttcagggagccgttcggaccaacgagcgt
cttaaggtggccctgcgtagccttcctgaggaggtcgttcgtgagacaggggagtaccgc
atgctgcaggcccagttctccctgctctacaatgagtctttgcaagtgaagacccagcta
gatgaggcccggggattgctgctggcctccaagaactcccacttgagacacattgaacat
atggagagtgatgagctggggctgcagaagaagctgcgcacggaagttatccagctggaa
gacaccctggcccaagtgcgcaaggagtacgagatgctgcgcatcgagtttgaacagaac
cttgcggccaacgagcaggccgggcctatcaaccgggaaatgcgccacctgattagcagc
ctccagaaccacaatcaccagctaaaaggagatgcccagcgatacaagcggaaacttcga
gaagtacaggctgagattgctaaactccgggcacaggccagcggctcttcccactgcatt
cccaccctgagccacccagatgaccctggcctcagtgcccttgccccagggaaggaagat
agtgggccaggccctggaggtacccctgacagcaagaaggagatggctttagtggctgga
gccacctctgctacttcttccataaagaaagaggagctggtctcctctgaagatgacgcc
caggccctaacccctgtaacccagggcttgccctccaggggtcgagaacctgaggccaga
cccaagcgagaacttcgggaacgggaagggcctagcctaggacccccacctgcagcctca
actctgtcaagggctgatcgagaaaaggccaaggtggaagaagccaaaaggaaggagtcg
gacctgctcaaaggtctccgagcagagctcaagaaggctcaggaaagccagaaggagatg
aagctgctcctggacatgtacaagtcagcgcccaaggagcagcgggacaaggtgcagctc
atggcagctgagcgcaaggccaaggccgaggtggatgagcttcggagccgcatccgagag
ctggaagaacgagaccgaagagaaagcaagaagattgcggatgaggatgccctgcggcgg
atccggcaggcagaagagcaaattgaacacttgcaacgcaaattgggtgccaccaagcag
gaggaggaggcgttgctgtcagagatggatgtaacaggtcaggcttttgaagacatgcag
gagcaaaacgggcggctgctccagcagttacgggaaaaggatgacgccaactttaagctc
atgtcagagcggatcaaggccaaccagattcacaagctgctccgagaggagaaggatgag
ttgggcgagcaggttcttggccttaagtcccaggtggacgcccagctgctgaccgtacag
aagctggaggaaaaggagcgggctctgcagggcagcctcgggggtgtggagaaggagttg
actctgcgcagccaggccctggagcttaataagagaaaggctgtagaagcagcccagttg
gctgaggacctgaaggtgcagttggagcatgtgcagactcggcttcgagagatccagccc
tgcctggcagagagccgggctgcccgcgagaaggagagcttcaacctcaagagggctcag
gaggacatttcccggcttcggcgaaaactagagaagcagcggaaagtggaggtttatgca
gatgctgacgagatcctgcaggaggagatcaaggagtacaaggcccggttgacctgcccc
tgctgtaacacccgcaagaaggacgctgtgcttaccaagtgcttccacgttttctgcttt
gaatgtgtgcggggccgctatgaagcccgccagaggaaatgtcccaagtgcaacgcagcc
tttggtgcccacgacttccaccgtgtgtacatcagctga
DBGET
integrated database retrieval system
