Mus caroli (Ryukyu mouse): 110297591
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Entry
110297591 CDS
T05910
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110297591 (Tmc5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110297591 (Tmc5)
03037 Cilium and associated proteins [BR:
mcal03037
]
110297591 (Tmc5)
Transporters [BR:
mcal02000
]
Other transporters
Pores ion channels [TC:
1
]
110297591 (Tmc5)
Cilium and associated proteins [BR:
mcal03037
]
Other cilia and associated proteins
Stereociliary proteins
110297591 (Tmc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
110297591
NCBI-ProteinID:
XP_021022077
Ensembl:
MGP_CAROLIEiJ_G0030367
UniProt:
A0A6P5Q0Y5
LinkDB
All DBs
Position
7:120777365..120855351
Genome browser
AA seq
968 aa
AA seq
DB search
MSSFHKNSSYMEDADYPGYSGSQNHTQNYLETQDYPEFPGSLNNPGFHHPRSNPHSSGSR
TNPDYPYFLEEPDYPGSPSNTDYQDTRSHPFSVHSRTRPDYESSLEPDYNDFRSESYHTG
LPMEPDYPGSQSHPGFAGVRRSSMNYTGPRTNLGYLGSLEEPDYPGAQDNSYYHSGSRSH
SNLPGSRRDAGYAGSRINSYPDDLGEPDYPGAENQPNSPRFYGKPDYPGAEEGDGYSSSK
SLGVIRRGNGPFGMLGRKNEDHPEGIGMVSMETAGDPRNGYVNPAYTRRSSPVCPDRNLL
LCAHDWHTSLQGQKLIASLIPMTTRDRIKTIRNQPRTMQEKRELRKIVDKEKNKQSHGIL
EANCCAQCLGSLSLTYRRTRNSLSELLNYITLWQKRFKVIGGKFGTSVLSYFSFLRWLLK
FNIFSFVMNFSFIIIPQFTVGTKNTLQFTGLEFFTGAGYFGDTVMYYGFYTNSTIRHRMG
GASYNMQLAYIFTIGACLVICFFSLLFSMAKYFRNNFINPHIYSRGIAKLIFCWDFTVTH
EKAVKLKQKNLSTEIRENLSELRQEKYRLTFNQQLTRFSAHVAAWLVSTGVTAACCVAVY
YLAEYNSEFLKTHRNPGAVLLLPFVVSCINLAVPRFYSMFRLVERYEIPRQEVYVLLIRN
IFLKISIVGILCYYWLNIVALSGEECWETLIGQDIYRLLLMDFVFSLADSLLGEFLRRLI
GMKFITSLSLQEFDIARNVLELIYAQTLTWLGIFFCPLLPFIQMITLFIMFYVKNVSLMM
NFQPPSKAWRASQMITFFIFLLFFPSFTGVLCTLAITIWRLKPSADCGPFRGLPSFIQSI
YSWIDTLSRRPGYLWVVWIYQNLIGSVHFFFILTLIVLIITYLYWQITEGRKVMIRLLHE
QIINEGKDKMFLIEKLTKLQDMEKRVNPSALDLERREVEPQIPLHLEELGAAPDLRLRRS
AQEENPIA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttccacaagaatagcagctacatggaagatgctgactaccctggttactca
gggtctcagaaccacacacagaactatttggaaactcaagattatccggaattcccaggc
tctctgaacaatccaggcttccaccatcccagaagcaacccgcattcttcgggctctaga
acaaacccagactacccctacttcctagaagagccagattatcctggatctccgagtaac
acagactatcaggacaccaggagccacccgttctctgtacattccagaacaaggccagac
tatgagtcttcacttgagccagactataatgacttcaggagtgaatcttaccacacaggt
ttacccatggagcctgactaccctggctctcagagccatcctggttttgcaggagtcaga
agaagcagtatgaactatacaggtcccagaaccaatctaggctatttgggatctctggaa
gaaccagactaccctggagctcaggacaactcttattatcattccggctccagatcccat
tccaacctgccaggctccagaagagatgcaggttatgctgggtccagaatcaattcctac
ccagatgatttgggggaacctgattacccaggtgctgagaatcaaccaaactctccccgt
ttttacggaaagccagactatcctggtgctgaagagggtgatggctatagctcttccaag
tccctgggagtcatcaggagagggaatggcccctttggcatgctaggcaggaagaatgaa
gatcaccctgaaggcattggaatggtatccatggagacggcaggtgatcctagaaatggc
tatgtgaatcctgcttacacaagaagaagtagtcctgtctgtccagatagaaacctattg
ctgtgcgcacatgattggcacacatcactccaaggacagaaactaattgcatccctgatt
cccatgacaactagagacagaatcaaaaccatcaggaaccagccaaggaccatgcaagag
aagagagagcttagaaaaatagttgacaaagaaaagaacaaacagtcgcatggcatcctc
gaggccaactgctgtgctcagtgtctgggctccctttcactgacttaccgcaggaccagg
aacagcctttcagagctcctcaattacatcaccttgtggcagaagagattcaaggtcatt
ggaggcaagtttggaaccagcgtcctgtcctatttcagcttcctgaggtggcttttgaag
ttcaacatcttctcattcgtcatgaacttcagcttcatcatcatcccacaattcaccgtg
ggcacaaagaacaccctccagttcactggcttggagtttttcacaggggcgggttatttt
ggggacacggtgatgtactatgggttctacaccaattctacaatccgacataggatgggc
ggagcatcctacaacatgcagctggcctacatcttcacgatcggagcctgcctggtcatc
tgtttcttcagtctactcttcagtatggccaagtacttccggaacaacttcatcaacccc
cacatatactccagagggattgctaagctcatcttctgctgggacttcactgtcacccat
gaaaaagctgtaaagctaaaacagaagaatctgagcacggagatcagggagaacctgtct
gagctccgccaggagaaatacaggctcacattcaaccagcagctgacccgattttctgct
cacgtagccgcttggctcgtctctactggagtgaccgcagcctgctgtgtagctgtctac
tacttggctgagtataactctgagttcctgaagacacacaggaaccccggggcggtgttg
ttgctgccctttgttgtgtcctgcatcaacctggccgtgcctcgcttctactccatgttc
cgcctggtggagaggtatgagataccaagacaggaagtctacgtcctcttgatccgaaac
atctttttgaagatctccattgttggaattctttgttactattggctcaacattgtggcc
ctgtctggtgaagagtgctgggagaccctcattggccaggacatctaccggctccttctc
atggacttcgtgttctccttggccgattccttactgggggagtttctgaggaggctcatt
gggatgaagttcatcaccagtctcagcctacaggagtttgacattgccaggaatgttcta
gaactgatctacgcacaaactctgacctggcttggaattttcttctgccctttgctgcct
tttatccaaatgatcactctcttcattatgttctatgtcaaaaacgtcagcctgatgatg
aacttccagcccccaagcaaggcctggagggcctcacagatgataactttcttcattttc
ttgctcttcttcccatccttcacgggagtgctgtgcaccctggctatcaccatctggaga
ctgaaaccttcggctgactgtggcccgttccgaggcctgccttccttcatccaatccatc
tacagctggattgacactctgagccgcaggcctggctacctgtgggtcgtctggatctac
cagaatctcattggaagtgtgcacttcttcttcatcctcaccctcattgtgctaatcatc
acctatctttactggcagatcacagaggggaggaaggtcatgattcgactgctccatgaa
cagatcattaatgagggcaaagataagatgttcctgatagagaaattgaccaagctacag
gatatggagaagagagtcaaccccagtgcgcttgacctggaaaggagagaggtggagcca
caaatccctttgcatttggaggaacttggtgctgctcctgacctgcgattgaggcggtca
gcacaagaggagaatcccatagcctga
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integrated database retrieval system
