Mus caroli (Ryukyu mouse): 110297595
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Entry
110297595 CDS
T05910
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcal03016
]
110297595 (Tsen34)
Enzymes [BR:
mcal01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
110297595 (Tsen34)
Transfer RNA biogenesis [BR:
mcal03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110297595 (Tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
110297595
NCBI-ProteinID:
XP_021022084
Ensembl:
MGP_CAROLIEiJ_G0029099
UniProt:
A0A6P5PU05
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All DBs
Position
7:465497..472908
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AA seq
335 aa
AA seq
DB search
MVVRFGREDGHLELRGSGTVGPGKMLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGAL
PRGPRQNSRLGLPLLLLPEEARLLAEIGAVTLVSAPRPDPRNHGLALASFKRQQEQSFQD
QNTLAAEARETRRQELLEKIVEGQAAKKQKLEQDSGADEEGQEAGGSEATQGSETSDDGQ
PSAEQEGADSSPQPGPSNGVTPLPRSALLIQLATARPRPVKAKPLDWRVQSKDWPHAGRP
AHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWSAEDPIPLQDLV
SAGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtggtacgctttggcagagaagatggtcacctggagctgagggggagcggaaccgtg
ggacctgggaagatgctggtggtggaggtcgctaatggccgctcgctggtgtggggagcc
gaggccgtgcaggcgctgcgggagcgtctgggagtcgggggacgcacggtgggcgccctg
ccccgcgggccccgccagaactcgcgcctgggccttccgcttctgctgctgcctgaagaa
gcccggctcctggccgagataggcgccgtgaccctagtcagcgccccgcgcccggacccc
cgcaaccatggcttggccctagcatcgttcaaacgccagcaagagcagagtttccaggat
cagaacactttggcagccgaggcccgggagacccggcgtcaggagcttctagagaagatc
gtagagggccaggctgccaagaagcagaagctggaacaggattcaggggcagatgaagaa
ggccaagaagccggtggaagtgaggctacccaagggagtgagaccagtgatgatggccag
ccttctgcggagcaggagggagcagattcatctccccaaccaggaccttcaaatggggtg
actcccttgcccagatcagccctgcttatccagctggccactgccaggcctcgacctgta
aaagctaagcctctggactggcgtgtgcagtccaaagactggccccacgctggccgtcct
gcccacgagctgcgctacagcatctacagagacctgtgggagagaggcttcttcctcagt
gcagcagggaagtttggtggtgacttcctggtctatcctggtgatccactgcgtttccat
gctcactacatagctcagtgctggtctgctgaggaccccatcccacttcaggacctggtc
tctgcaggccgcctgggaaccagtgtcaggaagaccctgctgctctgctcccctcagcct
gatgggaaggtggtctacacatccctgcagtgggccagcctgcagtga
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