KEGG   Mus caroli (Ryukyu mouse): 110297599
Entry
110297599         CDS       T05910                                 
Symbol
Tial1
Name
(RefSeq) nucleolysin TIAR isoform X4
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110297599 (Tial1)
   03041 Spliceosome [BR:mcal03041]
    110297599 (Tial1)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     110297599 (Tial1)
Spliceosome [BR:mcal03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    110297599 (Tial1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_Nup35 Nup35_RRM_2 Calcipressin
Other DBs
NCBI-GeneID: 110297599
NCBI-ProteinID: XP_021022096
Ensembl: MGP_CAROLIEiJ_G0030548
UniProt: A0A6P5Q5T3
LinkDB
Position
7:complement(130464344..130523930)
AA seq 392 aa
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQ
HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ
TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMG
GFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgatggaagacgacggacagccccggactctatacgtaggtaacctctccagagatgtg
acagaagtccttattcttcagttattcagtcagatcggaccctgtaaaagctgtaaaatg
ataacagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcag
catacaagcaatgacccatattgctttgtggaattttatgaacacagagatgcagctgct
gcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggca
acaacaccaagtagccagaaaaaagatacttccaatcacttccatgtgtttgttggggat
ttgagtccagaaattacaacagaagatatcaagtcagcatttgccccctttggtaaaata
tcggatgcccgggtagttaaagatatggcaactggaaagtccaaaggctatggttttgta
tctttttataacaaactggatgcagagaatgcaattgtgcatatggggggtcagtggctg
ggaggtcgacaaatcagaaccaattgggccacacgtaaaccacctgcccctaaaagtaca
caagaaactaacactaagcagttgagatttgaagatgtagtaaaccagtcaagtccaaaa
aactgcactgtgtactgtggagggattgcttcggggctgacagatcaacttatgagacaa
acattttcaccatttggacaaattatggaaataagagtttttccagagaagggctattcg
tttgtcagattttccactcatgagagtgcggcccacgctattgtctctgtgaatggcact
acaatcgaaggacatgtggtgaaatgctattggggtaaagaatctcctgatatgactaaa
aacttccaacaggttgactacagtcagtggggccagtggagccaagtgtatggaaaccca
caacagtatggacagtatatggcaaatgggtggcaagtaccgccctatggagtatatggg
cagccgtggaaccaacaaggatttggagtagatcaatcaccttctgctgcttggatgggt
ggatttggtgctcagcctcctcaaggacaagcccctccccctgtaatacctcctccaaac
caagctgggtatggaatggcaagtttcccgacacagtga

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