Mus caroli (Ryukyu mouse): 110297610
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Entry
110297610 CDS
T05910
Symbol
U2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110297610 (U2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110297610 (U2af2)
Spliceosome [BR:
mcal03041
]
Complex A
U2 snRNP components
U2 related factors
110297610 (U2af2)
Complex B
110297610 (U2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
110297610
NCBI-ProteinID:
XP_021022118
Ensembl:
MGP_CAROLIEiJ_G0029150
UniProt:
A0A6P5PZ86
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All DBs
Position
7:1739045..1757126
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AA seq
475 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP
VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataaacaagaacgggacaag
gagaatcggcacaggaagcgtagtcacagtcgctctcgaagccgagatcgaaagcgcagg
agcaggagccgagatcggcgcaaccgggaccagcgcagtgcctctcgggataggagacga
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgttctccc
cgccatgagaagaagaagaaggtgcgtaaatactgggacgtgccgccgcctggctttgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagattccagccactgcc
cttctcccgaccatgactcctgatggtctggctgtgaccccaacgccagtgcctgtggtt
gggagccagatgaccagacaggccagacgtctctacgtgggcaacatcccttttggcatt
actgaggaggctatgatggacttcttcaatgcccagatgcgcttaggggggttgactcag
gcccctggcaacccagtcttggctgtgcagataaatcaagacaagaattttgcctttttg
gagttccggtcagtggatgagacaacccaggccatggcctttgatggcatcatcttccag
ggccagtcattgaagattcgaaggcctcatgactatcagccactgcctggcatgtcagag
aatccctctgtttatgtgcctggagttgtatccactgtagttccagattctgcccacaag
ctgttcatcgggggtttgcccaattacctaaatgatgatcaggtaaaagagctgctgaca
tcctttgggcctctcaaggccttcaacttggtcaaggatagtgccacagggctctccaag
ggctatgccttctgtgagtacgtggacatcaacgtcacagatcaggccattgcggggctg
aatgggatgcagctaggggacaagaagctgcttgtccagagggcgagtgtgggagccaag
aatgccacgctggtgagcctcccgagtaccatcaatcagacacctgtgacccttcaagtg
cctggcctgatgagctctcaggtgcagatgggcggtcacccaactgaggtcctgtgcctc
atgaacatggtgctgcctgaggagctgctggacgatgaggagtatgaggagattgtagag
gacgtacgagacgagtgcagcaagtatgggctggtcaaatccattgaaattccccgcccc
gtggacggcgtcgaggtgcctggctgtggaaagatctttgtggagttcacctctgtgttt
gactgccagaaagccatgcagggtctaaccggtcgcaagttcgccaacagagtggtggtc
acaaaatactgtgaccctgattcttaccaccgtcgggacttctggtag
DBGET
integrated database retrieval system
